RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CTAGE3PQ8IX95 158 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 OSBPL1AQ9BXW6 950 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 UGT1A7Q9HAW7 530 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 UGT1A10Q9HAW8 530 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 UGT1A8Q9HAW9 530 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 ETNK2Q9NVF9 386 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 GGA3Q9NZ52 723 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 ZC3H7BQ9UGR2 993 aaKnown RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 ZNF180Q9UJW8 692 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 CORO1CQ9ULV4 474 aaPredicted RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 EIF4E1BA6NMX2 242 aaKnown RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 GYG2O15488 501 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 CSDE1O75534 798 aaKnown RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 RFPL1O75677 317 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 MAP3K6O95382 1288 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 SNRPAP09012 282 aaKnown RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 TGM2P21980 687 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 OSBPP22059 807 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 MAGEA6P43360 314 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 NDST1P52848 882 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 IRX1P78414 480 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 KPNB1Q14974 876 aaKnown RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 CCDC14Q49A88 953 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 HSF5Q4G112 596 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 ACSBG2Q5FVE4 666 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 SLC9A4Q6AI14 798 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 ANO7Q6IWH7 933 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 ILDR2Q71H61 639 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 LRRN4Q8WUT4 740 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 NMUR2Q9GZQ4 415 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 IQCGQ9H095 443 aaKnown RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 IFT122Q9HBG6 1241 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 GBA2Q9HCG7 927 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 PCDH18Q9HCL0 1135 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 PLLPQ9Y342 182 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 HEY1Q9Y5J3 304 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 APOL1O14791 398 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 ZBED1O96006 694 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 CSH1P0DML2 217 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 CSH2P0DML3 217 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 ACADSP16219 412 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 BMPR2Q13873 1038 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 AMHR2Q16671 573 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 CA9Q16790 459 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 TEX44Q53QW1 395 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 LCLAT1Q6UWP7 414 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 APBB1IPQ7Z5R6 666 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 TEX9Q8N6V9 391 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 CFAP61Q8NHU2 1237 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 PCDH19Q8TAB3 1148 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 SPDL1Q96EA4 605 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 HPDLQ96IR7 371 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 FRMD8Q9BZ67 464 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 PDZD7Q9H5P4 517 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 MKS1Q9NXB0 559 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 TAS2R1Q9NYW7 299 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
LINC01001-201ENST00000526704 BARX2Q9UMQ3 279 aaPredicted RBP12.11□□□□□ -0.47
LINC01001-201ENST00000526704 PDCD11Q14690 1871 aaKnown RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 BCLAF3A2AJT9 711 aaKnown RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 A6NHS1 94 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 SLC15A5A6NIM6 579 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 DPYSL4O14531 572 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 KRT36O76013 467 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 KRT37O76014 449 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 PGK2P07205 417 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 RARBP10826 455 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 MCF2P10911 925 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 BST1Q10588 318 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 VGLL4Q14135 290 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 PDK2Q15119 407 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 RCN1Q15293 331 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 CCDC62Q6P9F0 684 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 UNC5AQ6ZN44 842 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 ZNF534Q76KX8 674 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 EGFL6Q8IUX8 553 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 ARMC2Q8NEN0 867 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 DNAJC9Q8WXX5 260 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 USP6NLQ92738 828 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 COPS5Q92905 334 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 C7orf26Q96N11 449 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 TRIM56Q9BRZ2 755 aaKnown RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 SNRNP25Q9BV90 132 aaKnown RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 NFKBIZQ9BYH8 718 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 KLC2Q9H0B6 622 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 PRMT7Q9NVM4 692 aaPredicted RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 NMRK1Q9NWW6 199 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 CCDC195A0A1B0GUA6 201 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 USP2O75604 605 aaPredicted RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 CNMDO75829 334 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 C22orf31O95567 290 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 APOEP02649 317 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 APRTP07741 180 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 ESRRAP11474 423 aaPredicted RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 P4HA1P13674 534 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms