RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 GAD2Q05329 585 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 CT47A1Q5JQC4 288 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 ENOSF1Q7L5Y1 443 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 SCD5Q86SK9 330 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 LONP2Q86WA8 852 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 SCML4Q8N228 414 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 RUBCNQ92622 972 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 CNOT6LQ96LI5 555 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 TBX18O95935 607 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 ERCC5P28715 1186 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 PDE4CQ08493 712 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 CNGA2Q16280 664 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 PKDCCQ504Y2 493 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 C10orf120Q5SQS8 335 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 BBS7Q8IWZ6 715 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 CAMKK1Q8N5S9 505 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 KCTD13Q8WZ19 329 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 IPO9Q96P70 1041 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 GBP4Q96PP9 640 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 INTS2Q9H0H0 1204 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 LRRC4Q9HBW1 653 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 SPHK2Q9NRA0 654 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 SLC8A2Q9UPR5 921 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 CNTN6Q9UQ52 1028 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 ZNF510Q9Y2H8 683 aa19.38■□□□□ 0.69
TSPAN4-216ENST00000526055 MYO16Q9Y6X6 1858 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 A0A0A0MRY4 1105 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 GTPBP10A4D1E9 387 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 GREM1O60565 184 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 ZBED1O96006 694 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 TKTL1P51854 596 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 ZNF132P52740 706 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 COG7P83436 770 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 TPD52L1Q16890 204 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 HSF5Q4G112 596 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 LY6G5CQ5SRR4 150 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 BTBD8Q5XKL5 378 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 NAIF1Q69YI7 327 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 SYT13Q7L8C5 426 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 WDR5BQ86VZ2 330 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 FAM114A1Q8IWE2 563 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 RBBP8NLQ8NC74 664 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 EZH1Q92800 747 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 SECISBP2LQ93073 1101 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 MED15Q96RN5 788 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 PNKPQ96T60 521 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 THAP9Q9H5L6 903 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 LMBRD1Q9NUN5 540 aa19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.37■□□□□ 0.69
TSPAN4-216ENST00000526055 GVINP1Q7Z2Y8 2422 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 OTOGLQ3ZCN5 2332 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 APODP05090 189 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 IRF1P10914 325 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 YWHAGP61981 247 aaKnown RBP eCLIP19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 MRPS21P82921 87 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 MEA1Q16626 185 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 PKN3Q6P5Z2 889 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 NUDT18Q6ZVK8 323 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 RRAGAQ7L523 313 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 ARHGEF19Q8IW93 802 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 RPLP0P6Q8NHW5 317 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 DCLK3Q9C098 648 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 CNGB3Q9NQW8 809 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 OLA1Q9NTK5 396 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 RAB23Q9ULC3 237 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 STRIP2Q9ULQ0 834 aa19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 SMG5Q9UPR3 1016 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-216ENST00000526055 EP300Q09472 2414 aaPredicted RBP19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 K7EQS6 105 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 SCAMP3O14828 347 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 GRIA2P42262 883 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 FNTBP49356 437 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 GBP6Q6ZN66 633 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 Q6ZNB5 142 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 IRF2BP1Q8IU81 584 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 ETFBKMTQ8IXQ9 262 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 SIX6OS1Q8N1H7 587 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 USP33Q8TEY7 942 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 SLC35F5Q8WV83 523 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 TFAP2BQ92481 460 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 KAT5Q92993 513 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 HSFY1Q96LI6 401 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 KREMEN1Q96MU8 473 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 ULBP1Q9BZM6 244 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 C2orf42Q9NWW7 574 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 MARK1Q9P0L2 795 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 WDR35Q9P2L0 1181 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 DMXL1Q9Y485 3027 aa19.35■□□□□ 0.69
TSPAN4-216ENST00000526055 GOLGA6L22H0YM25 854 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 RNF225M0QZC1 329 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 TULP2O00295 520 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 STC2O76061 302 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 KAT7O95251 611 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 TNFRSF4P43489 277 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 MFAP3P55082 362 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 TRIM65Q6PJ69 517 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 RSRC2Q7L4I2 434 aaKnown RBP19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 GPR161Q8N6U8 529 aaKnown RBP19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 UBA3Q8TBC4 463 aa19.34■□□□□ 0.69
TSPAN4-216ENST00000526055 KCNV2Q8TDN2 545 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms