RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 HS6ST2Q96MM7 605 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 ASAP1Q9ULH1 1129 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 FZD4Q9ULV1 537 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 USP19O94966 1318 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 E2F8A0AVK6 867 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 H7C4K7 107 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 PARP1P09874 1014 aaKnown RBP4.96□□□□□ -1.62
CSDE1-210ENST00000525878 CT47B1P0C2W7 299 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-210ENST00000525878 HGFP14210 728 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 KLRC1P26715 233 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 SLC7A1P30825 629 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 GATMP50440 423 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 GPC5P78333 572 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 COLCA1Q6ZS62 124 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 EPM2AIP1Q7L775 607 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-210ENST00000525878 MMP21Q8N119 569 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 METTL25Q8N6Q8 603 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 PNPLA1Q8N8W4 532 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 ZBTB34Q8NCN2 500 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 JPH3Q8WXH2 748 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-210ENST00000525878 NMD3Q96D46 503 aaKnown RBP4.96□□□□□ -1.62
CSDE1-210ENST00000525878 RTFDC1Q9BY42 306 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-210ENST00000525878 C22orf23Q9BZE7 217 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 NKX1-2Q9UD57 310 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-210ENST00000525878 RIMKLBQ9ULI2 386 aa4.96□□□□□ -1.62
CSDE1-210ENST00000525878 GTPBP1O00178 669 aaKnown RBP4.95□□□□□ -1.62
CSDE1-210ENST00000525878 RGS10O43665 173 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 IGSF3O75054 1194 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 ALDH1L1O75891 902 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 TACR3P29371 465 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 PTDSS1P48651 473 aaKnown RBP4.95□□□□□ -1.62
CSDE1-210ENST00000525878 PGDP52209 483 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 ARHGEF7Q14155 803 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 UBAP2Q5T6F2 1119 aaKnown RBP4.95□□□□□ -1.62
CSDE1-210ENST00000525878 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 USP49Q70CQ1 688 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 TPH2Q8IWU9 490 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 RBMXL3Q8N7X1 1067 aaKnown RBP4.95□□□□□ -1.62
CSDE1-210ENST00000525878 B3GNT5Q9BYG0 378 aa4.95□□□□□ -1.62
CSDE1-210ENST00000525878 SEMA4BQ9NPR2 832 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-210ENST00000525878 TTBK1Q5TCY1 1321 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-210ENST00000525878 FYB1O15117 783 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 AKAP10O43572 662 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 CD19P15391 556 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 ADRA1DP25100 572 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 SUMO3P55854 103 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-210ENST00000525878 B4GALNT1Q00973 533 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 STIM1Q13586 685 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 PTPROQ16827 1216 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 EARS2Q5JPH6 523 aaKnown RBP4.94□□□□□ -1.62
CSDE1-210ENST00000525878 CC2D1BQ5T0F9 858 aaKnown RBP4.94□□□□□ -1.62
CSDE1-210ENST00000525878 LVRNQ6Q4G3 990 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 KIAA0319LQ8IZA0 1049 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 KRT78Q8N1N4 520 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 NGDNQ8NEJ9 315 aaKnown RBP4.94□□□□□ -1.62
CSDE1-210ENST00000525878 TMEM60Q9H2L4 133 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 HIPK2Q9H2X6 1198 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 TYW1Q9NV66 732 aaKnown RBP4.94□□□□□ -1.62
CSDE1-210ENST00000525878 DKK4Q9UBT3 224 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 ZNF180Q9UJW8 692 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 SPATA31A1Q5TZJ5 1347 aa4.94□□□□□ -1.62
CSDE1-210ENST00000525878 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-210ENST00000525878 ISM1B1AKI9 464 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 FRS3O43559 492 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 RFPL1O75677 317 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 TTF1Q15361 905 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-210ENST00000525878 ST3GAL2Q16842 350 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 FAM110CQ1W6H9 321 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 DAB2IPQ5VWQ8 1189 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 C16orf71Q8IYS4 520 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-210ENST00000525878 P2RY11Q96G91 374 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 GPATCH3Q96I76 525 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 ZNF668Q96K58 619 aaPredicted RBP4.93□□□□□ -1.62
CSDE1-210ENST00000525878 LRGUKQ96M69 825 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 TM2D2Q9BX73 214 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 FAM83DQ9H4H8 585 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 TMEM8AQ9HCN3 771 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 MLXIPLQ9NP71 852 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 CPNE7Q9UBL6 633 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 VPS51Q9UID3 782 aa4.93□□□□□ -1.62
CSDE1-210ENST00000525878 CAPN8A6NHC0 703 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 C2CD4BA6NLJ0 364 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 RRHO14718 337 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 PIAS2O75928 621 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 ZNF549Q6P9A3 640 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 APOA5Q6Q788 366 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 BCAS4Q8TDM0 211 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 RUNDC1Q96C34 613 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 CTAGE1Q96RT6 745 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 CDH19Q9H159 772 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 MLXIPQ9HAP2 919 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 AGO4Q9HCK5 861 aaKnown RBP4.92□□□□□ -1.62
CSDE1-210ENST00000525878 STEAP1Q9UHE8 339 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 L1RE1Q9UN81 338 aa4.92□□□□□ -1.62
CSDE1-210ENST00000525878 NOP58Q9Y2X3 529 aaKnown RBP4.92□□□□□ -1.62
CSDE1-210ENST00000525878 IGLV5-39A0A0G2JS06 123 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 INPPL1O15357 1258 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 PRAMEF2O60811 474 aa4.91□□□□□ -1.62
CSDE1-210ENST00000525878 RASSF9O75901 435 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms