RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 RARGP13631 454 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 IFNAR1P17181 557 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ATP5JP18859 108 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 CAPZA2P47755 286 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 CDH15P55291 814 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 PSMC6P62333 389 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 PTH1RQ03431 593 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 IKZF1Q13422 519 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 CRYMQ14894 314 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 E2F5Q15329 346 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ADIPOQQ15848 244 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ZNF674Q2M3X9 581 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 MGAT5BQ3V5L5 792 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 RALGPS1Q5JS13 557 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 METTL24Q5JXM2 366 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 MANEALQ5VSG8 457 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 GARNL3Q5VVW2 1013 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ABLIM2Q6H8Q1 611 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 TATDN1Q6P1N9 297 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 C11orf88Q6PI97 169 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 SLC30A9Q6PML9 568 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 MED25Q71SY5 747 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ZNF572Q7Z3I7 529 aaPredicted RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 GPR149Q86SP6 731 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 RPAINQ86UA6 219 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ZC3H18Q86VM9 953 aaKnown RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 ZFPM1Q8IX07 1006 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 CCAR2Q8N163 923 aaKnown RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 DNERQ8NFT8 737 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 NKD2Q969F2 451 aaPredicted RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 SAAL1Q96ER3 474 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 SIPA1Q96FS4 1042 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 HRASLS5Q96KN8 279 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 FAM227BQ96M60 508 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 CITED2Q99967 270 aaPredicted RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 FSD1Q9BTV5 496 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 PHF7Q9BWX1 381 aaPredicted RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 DNAI2Q9GZS0 605 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 CCDC134Q9H6E4 229 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 KAT14Q9H8E8 782 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 FSCN3Q9NQT6 498 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ZDHHC7Q9NXF8 308 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ALKBH4Q9NXW9 302 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 STOML1Q9UBI4 398 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ZNF70Q9UC06 446 aaPredicted RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 Q9UFV3 132 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 MOSPD1Q9UJG1 213 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ZFP69BQ9UJL9 534 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 CDC42EP3Q9UKI2 254 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 SARDHQ9UL12 918 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 ANGEL1Q9UNK9 670 aaKnown RBP5.86□□□□□ -1.47
USP47-204ENST00000525078 AGAP1Q9UPQ3 857 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 KCNE2Q9Y6J6 123 aa5.86□□□□□ -1.47
USP47-204ENST00000525078 OR2W5A6NFC9 320 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 C1QTNF9BB2RNN3 333 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 WNT10BO00744 389 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 IPO8O15397 1037 aaKnown RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 HNRNPRO43390 633 aaKnown RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 SRGAP2O75044 1071 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 KIF20AO95235 890 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 PDE8BO95263 885 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 SLC4A1P02730 911 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 TPM2P07951 284 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 SPATA31C1P0DKV0 1188 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 ALADP13716 330 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 TBXAS1P24557 533 aaPredicted RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 VIPR2P41587 438 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 GPD2P43304 727 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 CPA2P48052 419 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 STAT5BP51692 787 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 HK2P52789 917 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 TPD52P55327 224 aaPredicted RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 HSD17B7P56937 341 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 EVCP57679 992 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 RNASELQ05823 741 aaKnown RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 ZNF750Q32MQ0 723 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 LRRC24Q50LG9 513 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 KRTCAP3Q53RY4 240 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 CBWD5Q5RIA9 395 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 ATXN7L2Q5T6C5 722 aaPredicted RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 INTS5Q6P9B9 1019 aaKnown RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 IYDQ6PHW0 289 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 PET117Q6UWS5 81 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 CD300LDQ6UXZ3 194 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 UBE3BQ7Z3V4 1068 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 ADGRG6Q86SQ4 1221 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 CD163Q86VB7 1156 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 GAS2L3Q86XJ1 694 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 SCN4BQ8IWT1 228 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 STPG3Q8N7X2 389 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 DTX3Q8N9I9 347 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 ZBTB8BQ8NAP8 495 aaPredicted RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 SLC17A8Q8NDX2 589 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 NOC3LQ8WTT2 800 aaKnown RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 SCAMP4Q969E2 229 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 IWS1Q96ST2 819 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 HTATIP2Q9BUP3 242 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 THUMPD3Q9BV44 507 aaKnown RBP5.85□□□□□ -1.47
USP47-204ENST00000525078 MECRQ9BV79 373 aa5.85□□□□□ -1.47
USP47-204ENST00000525078 ACAT2Q9BWD1 397 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms