RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 KIF16BQ96L93 1317 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 DUOX1Q9NRD9 1551 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 SZT2Q5T011 3432 aa3.63□□□□□ -1.83
CSDE1-208ENST00000524652 IBTKQ9P2D0 1353 aaPredicted RBP3.63□□□□□ -1.83
CSDE1-208ENST00000524652 RIC1Q4ADV7 1423 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 AKAP11Q9UKA4 1901 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 TIAM2Q8IVF5 1701 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 KRTAP29-1A8MX34 341 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 TARM1B6A8C7 271 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SLC16A6O15403 523 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SERPINB2P05120 415 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 GJB1P08034 283 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 NBPF7P0C2Y1 421 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 NR2F6P10588 404 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 RARBP10826 455 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 KCNA3P22001 575 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 PCSK6P29122 969 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 PIK3CGP48736 1102 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF135P52742 658 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 PSMC1P62191 440 aaKnown RBP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 IRX6P78412 446 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SSBP2P81877 361 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 TFF2Q03403 129 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 ITKQ08881 620 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SNAPC2Q13487 334 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 BMPR2Q13873 1038 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 GCKRQ14397 625 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 KIF22Q14807 665 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SRSF7Q16629 238 aaKnown RBP eCLIP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 RBM20Q5T481 1227 aaKnown RBP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 THEMIS2Q5TEJ8 643 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF425Q6IV72 752 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 TAF2Q6P1X5 1199 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SLC30A10Q6XR72 485 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 PPP1R32Q7Z5V6 425 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 PNMA8AQ86V59 439 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-208ENST00000524652 FAM90A1Q86YD7 464 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 CAMKK1Q8N5S9 505 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 VGLL2Q8N8G2 317 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 C3orf20Q8ND61 904 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 ATRIPQ8WXE1 791 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 DDB2Q92466 427 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 ARHGAP45Q92619 1136 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 FAM136AQ96C01 138 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 MTMR8Q96EF0 704 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SUCLG2Q96I99 432 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 MEIS3Q99687 375 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 ACTRT3Q9BYD9 372 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 AMBRA1Q9C0C7 1298 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 USP44Q9H0E7 712 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 WDCPQ9H6R7 721 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SERTAD4Q9NUC0 356 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 ZDHHC8Q9ULC8 765 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 UTYO14607 1347 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 MYH7P12883 1935 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 AK9Q5TCS8 1911 aa3.62□□□□□ -1.83
CSDE1-208ENST00000524652 SNED1Q8TER0 1413 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 WDR91A4D1P6 747 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 PROB1E7EW31 1015 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 DDX58O95786 925 aaKnown RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 LATS1O95835 1130 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 PCCAP05165 728 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 EBLN1P0CF75 366 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 SMARCA1P28370 1054 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 PRDX5P30044 214 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 CD6P30203 668 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 CHRNA5P30532 468 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 EIF2B5Q13144 721 aaKnown RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 GRM1Q13255 1194 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 PCBP2Q15366 365 aaKnown RBP eCLIP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF618Q5T7W0 954 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 RNF187Q5TA31 235 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 CEP85Q6P2H3 762 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 ZNF551Q7Z340 670 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 ANKRD44Q8N8A2 993 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 Q8N9P0 234 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 CCDC191Q8NCU4 936 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 LINS1Q8NG48 757 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 TBC1D5Q92609 795 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 API5Q9BZZ5 524 aaKnown RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 TINAGL1Q9GZM7 467 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 SMOC2Q9H3U7 446 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 CWC25Q9NXE8 425 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 SERGEFQ9UGK8 458 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 TRMT112Q9UI30 125 aaKnown RBP3.61□□□□□ -1.83
CSDE1-208ENST00000524652 CDHR2Q9BYE9 1310 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 COL4A5P29400 1685 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 ADAMTSL1Q8N6G6 1762 aa3.61□□□□□ -1.83
CSDE1-208ENST00000524652 CDK5RAP2Q96SN8 1893 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 PNMA6EA0A0J9YXQ4 647 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 PRSS29PA6NIE9 313 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 ALG1L2C9J202 215 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 GRM8O00222 908 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 DTNBO60941 627 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 ALDH1L1O75891 902 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 JTBO76095 146 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 GNAI2P04899 355 aa3.6□□□□□ -1.83
CSDE1-208ENST00000524652 HNRNPCP07910 306 aaKnown RBP eCLIP3.6□□□□□ -1.833e-6■■■□□ 18.5
CSDE1-208ENST00000524652 NDUFB7P17568 137 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms