RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 FLRT1Q9NZU1 646 aa4.05□□□□□ -1.76
HDAC2-215ENST00000523334 ZC3H7BQ9UGR2 993 aaKnown RBP4.05□□□□□ -1.76
HDAC2-215ENST00000523334 CDH9Q9ULB4 789 aa4.05□□□□□ -1.76
HDAC2-215ENST00000523334 RRP15Q9Y3B9 282 aaKnown RBP4.05□□□□□ -1.76
HDAC2-215ENST00000523334 COL11A1P12107 1806 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TMEM120BA0PK00 339 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 PAPSS1O43252 624 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 GPR32O75388 356 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 KRT38O76015 456 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ITGBL1O95965 494 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 MOCS2O96007 188 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 SRGAP2BP0DMP2 458 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 PAX3P23760 479 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 PDE1BQ01064 536 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 MMRN1Q13201 1228 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TUSC3Q13454 348 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 LRRC14Q15048 493 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 FAXCQ5TGI0 409 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 DRICH1Q6PGQ1 229 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TTC30AQ86WT1 665 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 REM2Q8IYK8 340 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 WDTC1Q8N5D0 677 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 LINC01465Q8N7H1 131 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 MDM1Q8TC05 714 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 WNT8BQ93098 351 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 SLC4A5Q9BY07 1137 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 KATNBL1Q9H079 304 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TRABDQ9H4I3 376 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 POPDC2Q9HBU9 364 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 DMAP1Q9NPF5 467 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 CYLDQ9NQC7 956 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ZDHHC18Q9NUE0 388 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ABI2Q9NYB9 513 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 KANSL3Q9P2N6 904 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 PSMC3IPQ9P2W1 217 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 PTCH2Q9Y6C5 1203 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 I3L4J1 428 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 CLDN5O00501 218 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 HGSO14964 777 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 LTFP02788 710 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 SHBGP04278 402 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TROVE2P10155 538 aaKnown RBP eCLIP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 HOXD8P13378 290 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ETS1P14921 441 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TCF4P15884 667 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 AMPD1P23109 780 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 LMO2P25791 158 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 EPHB2P29323 1055 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 RPL22P35268 128 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 MATKP42679 507 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 YWHAHQ04917 246 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 GRIK3Q13003 919 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TAF5Q15542 800 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ZRSR2Q15696 482 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TXNRD3NBQ6F5E7 133 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ITPRIPL1Q6GPH6 555 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ZDHHC24Q6UX98 284 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 LRRC31Q6UY01 552 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TMEM110Q86TL2 294 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 PRUNE1Q86TP1 453 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 UBR7Q8N806 425 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 CMASQ8NFW8 434 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TFB1MQ8WVM0 346 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TEKT4Q8WW24 435 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 SEC14L1Q92503 715 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 HNRNPABQ99729 332 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ELAC2Q9BQ52 826 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ZNF670Q9BS34 389 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 DPEP3Q9H4B8 488 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 WDCPQ9H6R7 721 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 C10orf88Q9H8K7 445 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 PCDH18Q9HCL0 1135 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 XAB2Q9HCS7 855 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 GDAP2Q9NXN4 497 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 F5H423 210 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 MTSS1O43312 755 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 FAM107AO95990 144 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 APOEP02649 317 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 CHKAP35790 457 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 PTPN9P43378 593 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 NR2C2P49116 596 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 SESN2P58004 480 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 MRPS5P82675 430 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ITKQ08881 620 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 ZC3H12AQ5D1E8 599 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 GDF6Q6KF10 455 aaPredicted RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 STRADAQ7RTN6 431 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 FAM35AQ86V20 835 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 VSIG1Q86XK7 387 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 FBF1Q8TES7 1133 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TMEM40Q8WWA1 233 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TRIB2Q92519 343 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 SEPT8Q92599 483 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 EDEM1Q92611 657 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 COLEC11Q9BWP8 271 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 HAUS2Q9NVX0 235 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 GABRQQ9UN88 632 aa4.04□□□□□ -1.76
HDAC2-215ENST00000523334 SMG5Q9UPR3 1016 aaKnown RBP4.04□□□□□ -1.76
HDAC2-215ENST00000523334 TLL2Q9Y6L7 1015 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms