RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 GRIK3Q13003 919 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 PON2Q15165 354 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 SLC14A2Q15849 920 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 CDR2LQ86X02 465 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-210ENST00000522843 MFSD6LQ8IWD5 586 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 TTC8Q8TAM2 541 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 DEPDC1BQ8WUY9 529 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 TMEM143Q96AN5 459 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 CHFRQ96EP1 664 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 CCDC74BQ96LY2 380 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 RIT2Q99578 217 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 KIF2CQ99661 725 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 ASPNQ9BXN1 380 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 LRRC2Q9BYS8 371 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 CSRNP2Q9H175 543 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 TRPV4Q9HBA0 871 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 BRMS1Q9HCU9 246 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 WRAP73Q9P2S5 460 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-210ENST00000522843 CDY1Q9Y6F8 540 aa7.32□□□□□ -1.24
SDCBP-210ENST00000522843 CCDC69A6NI79 296 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 B4GALT5O43286 388 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 AKAP3O75969 853 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 C1QL1O75973 258 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 CAVIN2O95810 425 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 PRB1P04280 392 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 CCDC192P0DO97 292 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 PTPN2P17706 415 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 ARF4P18085 180 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-210ENST00000522843 RPL10P27635 214 aaKnown RBP7.31□□□□□ -1.24
SDCBP-210ENST00000522843 SFNP31947 248 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 LIFRP42702 1097 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 JAK3P52333 1124 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 FAM193AP78312 1265 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 CREB5Q02930 508 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 FCHO2Q0JRZ9 810 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 TUSC3Q13454 348 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 VMACQ2NL98 169 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 DGKKQ5KSL6 1271 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 DAB2IPQ5VWQ8 1189 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 RNF111Q6ZNA4 994 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 RTL10Q7L3V2 364 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 MICU3Q86XE3 530 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 PHACTR4Q8IZ21 702 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 RNF149Q8NC42 400 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 ENOX1Q8TC92 643 aaKnown RBP7.31□□□□□ -1.24
SDCBP-210ENST00000522843 ZFYVE19Q96K21 471 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 MTA3Q9BTC8 594 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 BACH2Q9BYV9 841 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 DHX33Q9H6R0 707 aaKnown RBP7.31□□□□□ -1.24
SDCBP-210ENST00000522843 GTSE1Q9NYZ3 720 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 CEP72Q9P209 647 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 ADAMTS1Q9UHI8 967 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 TCEAL9Q9UHQ7 104 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 GGT7Q9UJ14 662 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 ZMYM5Q9UJ78 669 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 KIF26AQ9ULI4 1882 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-210ENST00000522843 HECTD1Q9ULT8 2610 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 PCDHB14Q9Y5E9 798 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 ZNF462Q96JM2 2506 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 PLXNB3Q9ULL4 1909 aa7.31□□□□□ -1.24
SDCBP-210ENST00000522843 hCG_1984214I3L0E3 225 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 MEFVO15553 781 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 GAS7O60861 476 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 ABLIM3O94929 683 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 NPTXRO95502 500 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 ZNF16P17020 682 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 TKTP29401 623 aaKnown RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 KIR2DL1P43626 348 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 KIR2DL2P43627 348 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 KPNA1P52294 538 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 PTENP60484 403 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 YBX1P67809 324 aaKnown RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 ROR1Q01973 937 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 MBTD1Q05BQ5 628 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 SPIRE1Q08AE8 756 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 SCAPQ12770 1279 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 TEAD2Q15562 447 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 LRCH2Q5VUJ6 765 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 NOTUMQ6P988 496 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 MIER3Q7Z3K6 550 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 PIP4P1Q86T03 277 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 FERMT3Q86UX7 667 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 SGMS1Q86VZ5 419 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 TMTC2Q8N394 836 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 CHCHD4Q8N4Q1 142 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 ZNF713Q8N859 430 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 PSPC1Q8WXF1 523 aaKnown RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 CCDC51Q96ER9 411 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 MSANTD3Q96H12 275 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 TEKT3Q9BXF9 490 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 LRRC3Q9BY71 257 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 C8orf33Q9H7E9 229 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-210ENST00000522843 TMEM9BQ9NQ34 198 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 ANKFY1Q9P2R3 1169 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 BACE2Q9Y5Z0 518 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 SLC12A7Q9Y666 1083 aa7.3□□□□□ -1.24
SDCBP-210ENST00000522843 GON4LQ3T8J9 2241 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 URB1O60287 2271 aaKnown RBP7.29□□□□□ -1.24
SDCBP-210ENST00000522843 ESYT2A0FGR8 921 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 I3L4J1 428 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms