RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SLC32A1Q9H598 525 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 PLEKHA5Q9HAU0 1116 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 POLD4Q9HCU8 107 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 LARSQ9P2J5 1176 aaKnown RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 ARHGAP28Q9P2N2 729 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 UXTQ9UBK9 157 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 MAGED2Q9UNF1 606 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 KIF3AQ9Y496 699 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 PDCD11Q14690 1871 aaKnown RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 K7ENM7 598 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 BIN1O00499 593 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 EXTL3O43909 919 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 DTNBO60941 627 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 ALDH1A2O94788 518 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 KCNK5O95279 499 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 CAVIN2O95810 425 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 KRT18P05783 430 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 PROS1P07225 676 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 RNASE1P07998 156 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 GSTP1P09211 210 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 CLTAP09496 248 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 SLFN14P0C7P3 912 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 CYP3A5P20815 502 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 DRD1P21728 446 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 HOXA6P31267 233 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 ABCD1P33897 745 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 TRAPPC10P48553 1259 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 DGKEP52429 567 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 HMGN5P82970 282 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 TNK2Q07912 1038 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 RAD51AP2Q09MP3 1159 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 SMARCB1Q12824 385 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 GPR17Q13304 367 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 RUNX3Q13761 415 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 MRPL58Q14197 206 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 TMEM132DQ14C87 1099 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 UAP1L1Q3KQV9 507 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 SEZ6Q53EL9 994 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 USP39Q53GS9 565 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 STXBP5Q5T5C0 1151 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 DNAJB7Q7Z6W7 309 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 TTC30AQ86WT1 665 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 TMC8Q8IU68 726 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 DCP1BQ8IZD4 617 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 CAMKK1Q8N5S9 505 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 FSIP1Q8NA03 581 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 ATAD1Q8NBU5 361 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 TSTD1Q8NFU3 115 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 SPPL2BQ8TCT7 592 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 C2orf15Q8WU43 125 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 ATP2A3Q93084 1043 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 ZMAT2Q96NC0 199 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 NUSAP1Q9BXS6 441 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 FOXP1Q9H334 677 aaPredicted RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 TRPC7Q9HCX4 862 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 TMEM9BQ9NQ34 198 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 MBNL3Q9NUK0 354 aaKnown RBP6.72□□□□□ -1.33
PABPC1-220ENST00000522658 ADAMTS6Q9UKP5 1117 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 RALGAPA1Q6GYQ0 2036 aa6.72□□□□□ -1.33
PABPC1-220ENST00000522658 DOCK6Q96HP0 2047 aa6.71□□□□□ -1.33
PABPC1-220ENST00000522658 COL4A2P08572 1712 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 GPR179Q6PRD1 2367 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 C4orf47A7E2U8 309 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 E9PMD0 336 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 M0QZQ0 153 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 ARNTLO00327 626 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 LAD1O00515 517 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 JAK2O60674 1132 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 TBCAO75347 108 aaKnown RBP6.71□□□□□ -1.34
PABPC1-220ENST00000522658 MOSPD3O75425 235 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 LEFTY1O75610 366 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 SOAT2O75908 522 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 OAZ2O95190 189 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 CTDNEP1O95476 244 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 PRAMEF12O95522 483 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 CKMP06732 381 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 CSH1P0DML2 217 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 CSH2P0DML3 217 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 PLS3P13797 630 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 SCP2P22307 547 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 IGFBP6P24592 240 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-220ENST00000522658 LRPAP1P30533 357 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 DPP6P42658 865 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 DHPSP49366 369 aaPredicted RBP6.71□□□□□ -1.34
PABPC1-220ENST00000522658 PDE6CP51160 858 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 NEK4P51957 841 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 OXCT1P55809 520 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 SPAG1Q07617 926 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 MCL1Q07820 350 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 KCNB1Q14721 858 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 ACAP1Q15027 740 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 PDGFRLQ15198 375 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 ME3Q16798 604 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 SV2CQ496J9 727 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 XKR4Q5GH76 650 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 CD300LGQ6UXG3 332 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 ALKAL1Q6UXT8 129 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 ZPBP2Q6X784 338 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 DTHD1Q6ZMT9 781 aa6.71□□□□□ -1.34
PABPC1-220ENST00000522658 CD302Q8IX05 232 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms