RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 H3BQ06 376 aaPredicted RBP25.31■■□□□ 1.64
PVT1-212ENST00000521951 ZNF197O14709 1029 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 HSF2BPO75031 334 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 FYNP06241 537 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 KRT3P12035 628 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 PPP1R15BQ5SWA1 713 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 BTBD8Q5XKL5 378 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 SMRP1Q8NCR6 262 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 GOLGA1Q92805 767 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 GCNAQ96QF7 691 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 POPDC2Q9HBU9 364 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 WDR6Q9NNW5 1121 aaKnown RBP25.31■■□□□ 1.64
PVT1-212ENST00000521951 ABCC13Q9NSE7 274 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 CLIC5Q9NZA1 410 aa25.31■■□□□ 1.64
PVT1-212ENST00000521951 KCNA5P22460 613 aa25.3■■□□□ 1.64
PVT1-212ENST00000521951 VAV2P52735 878 aa25.3■■□□□ 1.64
PVT1-212ENST00000521951 CYP4F8P98187 520 aa25.3■■□□□ 1.64
PVT1-212ENST00000521951 JOSD2Q8TAC2 188 aa25.3■■□□□ 1.64
PVT1-212ENST00000521951 EDEM1Q92611 657 aa25.3■■□□□ 1.64
PVT1-212ENST00000521951 MRPS31Q92665 395 aaKnown RBP25.3■■□□□ 1.64
PVT1-212ENST00000521951 HLA-CQ95604 372 aa25.3■■□□□ 1.64
PVT1-212ENST00000521951 RIPOR3Q96MK2 946 aa25.3■■□□□ 1.64
PVT1-212ENST00000521951 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.3■■□□□ 1.643e-6■■■■□ 22.1
PVT1-212ENST00000521951 MRPS23Q9Y3D9 190 aaKnown RBP25.3■■□□□ 1.64
PVT1-212ENST00000521951 SCINQ9Y6U3 715 aa25.3■■□□□ 1.64
PVT1-212ENST00000521951 RARGP13631 454 aa25.29■■□□□ 1.64
PVT1-212ENST00000521951 MTHFRP42898 656 aa25.29■■□□□ 1.64
PVT1-212ENST00000521951 KIAA1328Q86T90 577 aa25.29■■□□□ 1.64
PVT1-212ENST00000521951 DEFB106AQ8N104 65 aa25.29■■□□□ 1.64
PVT1-212ENST00000521951 ITFG1Q8TB96 612 aa25.29■■□□□ 1.64
PVT1-212ENST00000521951 SLC2A13Q96QE2 648 aa25.29■■□□□ 1.64
PVT1-212ENST00000521951 MRPL47Q9HD33 250 aaKnown RBP25.29■■□□□ 1.64
PVT1-212ENST00000521951 NAALADL1Q9UQQ1 740 aa25.29■■□□□ 1.64
PVT1-212ENST00000521951 RALAP11233 206 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 RFC1P35251 1148 aaPredicted RBP25.28■■□□□ 1.64
PVT1-212ENST00000521951 RPL7AP62424 266 aaKnown RBP25.28■■□□□ 1.64
PVT1-212ENST00000521951 TEAD2Q15562 447 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 HECTD3Q5T447 861 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 TXNDC8Q6A555 127 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 BEND5Q7L4P6 421 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 ARCQ7LC44 396 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 ZNF276Q8N554 614 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 EMC1Q8N766 993 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 MAFAQ8NHW3 353 aaPredicted RBP25.28■■□□□ 1.64
PVT1-212ENST00000521951 MCEEQ96PE7 176 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 NUP85Q9BW27 656 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 CCSER2Q9H7U1 834 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 NUDT5Q9UKK9 219 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.28■■□□□ 1.64
PVT1-212ENST00000521951 CLUHO75153 1309 aa25.28■■□□□ 1.64
PVT1-212ENST00000521951 C2orf78A6NCI8 922 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 PJA2O43164 708 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 DAB1O75553 588 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 NCAM1P13591 858 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 FSHRP23945 695 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 FLT3P36888 993 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 SYPL2Q5VXT5 272 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 TRNP1Q6NT89 227 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 DCUN1D2Q6PH85 259 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 TRIM62Q9BVG3 475 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 LACRTQ9GZZ8 138 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 CTTNBP2NLQ9P2B4 639 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 A0A0U1RQJ8 604 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 CAPN9O14815 690 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 TLR5O60602 858 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 CCDC175P0C221 793 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 CEBPBP17676 345 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 ARHGAP15Q53QZ3 475 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 DCAF6Q58WW2 860 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 STXBP5Q5T5C0 1151 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 SLC35G2Q8TBE7 412 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 ATRIPQ8WXE1 791 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 ING5Q8WYH8 240 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 SUSD6Q92537 303 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 DDX23Q9BUQ8 820 aaKnown RBP25.27■■□□□ 1.64
PVT1-212ENST00000521951 TRPC7Q9HCX4 862 aa25.27■■□□□ 1.64
PVT1-212ENST00000521951 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.27■■□□□ 1.64
PVT1-212ENST00000521951 USP15Q9Y4E8 981 aaPredicted RBP25.27■■□□□ 1.64
PVT1-212ENST00000521951 GRXCR2A6NFK2 248 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 TMEM191CA6NGB0 347 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 C2CD4BA6NLJ0 364 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 TBX18O95935 607 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 OAS1P00973 400 aaKnown RBP25.26■■□□□ 1.63
PVT1-212ENST00000521951 NOS2P35228 1153 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 MATKP42679 507 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 TUBP50607 506 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 GPR158Q5T848 1215 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 TXLNBQ8N3L3 684 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 MAB21L3Q8N8X9 362 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 RNF139Q8WU17 664 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 RXFP2Q8WXD0 754 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 RFFLQ8WZ73 363 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 SLC46A2Q9BY10 475 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 TRIM7Q9C029 511 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 UVRAGQ9P2Y5 699 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 PYCARDQ9ULZ3 195 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 COG5Q9UP83 839 aa25.26■■□□□ 1.63
PVT1-212ENST00000521951 PDGFRAP16234 1089 aa25.25■■□□□ 1.63
PVT1-212ENST00000521951 DDX6P26196 483 aaKnown RBP eCLIP25.25■■□□□ 1.63
PVT1-212ENST00000521951 TCEAL1Q15170 157 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms