RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 ANTXRLA6NF34 631 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 DCLK1O15075 740 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 HOXC11O43248 304 aaPredicted RBP16.68■□□□□ 0.26
CLN8-205ENST00000520991 ALDH1A2O94788 518 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 RHOBTB1O94844 696 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 KLF8O95600 359 aaPredicted RBP16.68■□□□□ 0.26
CLN8-205ENST00000520991 RARGP13631 454 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 GBP1P32455 592 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 TNFRSF4P43489 277 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 MCCD1P59942 119 aaPredicted RBP16.68■□□□□ 0.26
CLN8-205ENST00000520991 STIM1Q13586 685 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 PLK5Q496M5 336 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 HSF5Q4G112 596 aaPredicted RBP16.68■□□□□ 0.26
CLN8-205ENST00000520991 USP39Q53GS9 565 aaKnown RBP16.68■□□□□ 0.26
CLN8-205ENST00000520991 C10orf120Q5SQS8 335 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 ANKRD40Q6AI12 368 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 TADA2BQ86TJ2 420 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 TXNDC5Q8NBS9 432 aaKnown RBP16.68■□□□□ 0.26
CLN8-205ENST00000520991 ENGASEQ8NFI3 743 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 WBP2Q969T9 261 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 ARID3AQ99856 593 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 KLF16Q9BXK1 252 aaPredicted RBP16.68■□□□□ 0.26
CLN8-205ENST00000520991 TPSD1Q9BZJ3 242 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 NMUR1Q9HB89 426 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 OSER1Q9NX31 292 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 DEC1Q9P2X7 70 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 DNMT3LQ9UJW3 386 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 NAGPAQ9UK23 515 aa16.68■□□□□ 0.26
CLN8-205ENST00000520991 EML5Q05BV3 1969 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 SLC30A4O14863 429 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 PSEN1P49768 467 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 KIF11P52732 1056 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 SLC8A3P57103 927 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 LRRC63Q05C16 580 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 SF3A2Q15428 464 aaKnown RBP16.67■□□□□ 0.26
CLN8-205ENST00000520991 CRY1Q16526 586 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 EOGTQ5NDL2 527 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 NUDT18Q6ZVK8 323 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 HTR3DQ70Z44 454 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 CCDC186Q7Z3E2 898 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 TMEM25Q86YD3 366 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 ETFBKMTQ8IXQ9 262 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 IL17RCQ8NAC3 791 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 SLC4A11Q8NBS3 891 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 TATDN2Q93075 761 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 TMEM176AQ96HP8 235 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
CLN8-205ENST00000520991 TIGD1Q96MW7 591 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 FAM124BQ9H5Z6 455 aaPredicted RBP16.67■□□□□ 0.26
CLN8-205ENST00000520991 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLN8-205ENST00000520991 ARMCX3Q9UH62 379 aaPredicted RBP16.67■□□□□ 0.26
CLN8-205ENST00000520991 NUDT5Q9UKK9 219 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 INVSQ9Y283 1065 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 PCDHGA5Q9Y5G8 931 aa16.67■□□□□ 0.26
CLN8-205ENST00000520991 SPAG17Q6Q759 2223 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 MYOFQ9NZM1 2061 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 A0A0A0MRY4 1105 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 TRIM49BA6NDI0 452 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 PSMA7O14818 248 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 MDM4O15151 490 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 GDF9O60383 454 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 TULP3O75386 442 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 ZNF806P0C7X5 589 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 RALAP11233 206 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 MPLP40238 635 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 KIR2DL1P43626 348 aaPredicted RBP16.66■□□□□ 0.26
CLN8-205ENST00000520991 PLA2G4AP47712 749 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 PMS1P54277 932 aaKnown RBP16.66■□□□□ 0.26
CLN8-205ENST00000520991 RAD23BP54727 409 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 EMC10Q5UCC4 262 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 KLHDC10Q6PID8 442 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 RASSF3Q86WH2 238 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
CLN8-205ENST00000520991 MDGA1Q8NFP4 955 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 SPATA20Q8TB22 786 aa16.66■□□□□ 0.26
CLN8-205ENST00000520991 CDK5RAP1Q96SZ6 601 aaKnown RBP16.66■□□□□ 0.26
CLN8-205ENST00000520991 DUSP15Q9H1R2 295 aaPredicted RBP16.66■□□□□ 0.26
CLN8-205ENST00000520991 POLMQ9NP87 494 aaPredicted RBP16.66■□□□□ 0.26
CLN8-205ENST00000520991 DNAJC17Q9NVM6 304 aaKnown RBP16.66■□□□□ 0.26
CLN8-205ENST00000520991 BCCIPQ9P287 314 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLN8-205ENST00000520991 NEDD8-MDP1E9PL57 170 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 SGK1O00141 431 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 YWHAEP62258 255 aaKnown RBP16.65■□□□□ 0.26
CLN8-205ENST00000520991 CREB5Q02930 508 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 C10orf76Q5T2E6 689 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 ISM2Q6H9L7 571 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 GRAMD4Q6IC98 578 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 TMEM92Q6UXU6 159 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 TPGS1Q6ZTW0 290 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 TRMT11Q7Z4G4 463 aaKnown RBP16.65■□□□□ 0.26
CLN8-205ENST00000520991 MIB1Q86YT6 1006 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 PHTF2Q8N3S3 785 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 TERB1Q8NA31 727 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 XPO6Q96QU8 1125 aaKnown RBP16.65■□□□□ 0.26
CLN8-205ENST00000520991 BBS2Q9BXC9 721 aa16.65■□□□□ 0.26
CLN8-205ENST00000520991 SMOC1Q9H4F8 434 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms