RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PGFP49763 221 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 VAV2P52735 878 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 DAOAP59103 153 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 TXNDC8Q6A555 127 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 PPP1R2P3Q6NXS1 205 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 POTEHQ6S545 545 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 PHLDB2Q86SQ0 1253 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 MAB21L3Q8N8X9 362 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 PDZD8Q8NEN9 1154 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 ST13P5Q8NFI4 369 aaPredicted RBP16.07■□□□□ 0.16
LSM1-203ENST00000520755 IPO4Q8TEX9 1081 aaKnown RBP16.07■□□□□ 0.16
LSM1-203ENST00000520755 ZNF653Q96CK0 615 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 C18orf8Q96DM3 657 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 ZSWIM3Q96MP5 696 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 LACRTQ9GZZ8 138 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 MIS12Q9H081 205 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 SCML2Q9UQR0 700 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 ANKRD62A6NC57 917 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 ZNF840PA6NDX5 716 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 CALB1P05937 261 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 H2AFZP0C0S5 128 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 TMEM253P0C7T8 217 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 LAMP2P13473 410 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 SPA17Q15506 151 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 PPP1R15BQ5SWA1 713 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 PM20D1Q6GTS8 502 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 HFE2Q6ZVN8 426 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 H2AFVQ71UI9 128 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 SCUBE3Q8IX30 993 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 SCML4Q8N228 414 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 ADAMTS19Q8TE59 1207 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 OVCA2Q8WZ82 227 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 KHSRPQ92945 711 aaKnown RBP eCLIP16.06■□□□□ 0.16
LSM1-203ENST00000520755 VCPIP1Q96JH7 1222 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 NECAB3Q96P71 396 aaPredicted RBP16.06■□□□□ 0.16
LSM1-203ENST00000520755 TASP1Q9H6P5 420 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 CNGB3Q9NQW8 809 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 GDE1Q9NZC3 331 aa16.06■□□□□ 0.16
LSM1-203ENST00000520755 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.06■□□□□ 0.16
LSM1-203ENST00000520755 CNOT8Q9UFF9 292 aaKnown RBP16.06■□□□□ 0.16
LSM1-203ENST00000520755 ZFP37Q9Y6Q3 630 aaPredicted RBP16.06■□□□□ 0.16
LSM1-203ENST00000520755 A0A1W2PQH9 124 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 C2orf78A6NCI8 922 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 LOC730098B7Z3J9 87 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 GOLGA8SH3BPF8 625 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 PJA2O43164 708 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 ZBED1O96006 694 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 CYP1A2P05177 515 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 DDX6P26196 483 aaKnown RBP eCLIP16.05■□□□□ 0.16
LSM1-203ENST00000520755 PPP3CCP48454 512 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 TAF5Q15542 800 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 C10orf76Q5T2E6 689 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 OR6B2Q6IFH4 312 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 PLEKHA7Q6IQ23 1121 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 TRNP1Q6NT89 227 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 MON1AQ86VX9 555 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 PLCD3Q8N3E9 789 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 MSANTD4Q8NCY6 345 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 C3orf20Q8ND61 904 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 ZSCAN18Q8TBC5 510 aaPredicted RBP16.05■□□□□ 0.16
LSM1-203ENST00000520755 SLC46A2Q9BY10 475 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 SYNCQ9H7C4 482 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 NMUR1Q9HB89 426 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 TLR8Q9NR97 1041 aaKnown RBP16.05■□□□□ 0.16
LSM1-203ENST00000520755 METTL5Q9NRN9 209 aaKnown RBP16.05■□□□□ 0.16
LSM1-203ENST00000520755 EPS15L1Q9UBC2 864 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 TRIM10Q9UDY6 481 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 LIMD1Q9UGP4 676 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 SALL4Q9UJQ4 1053 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 INTUQ9ULD6 942 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 STRIP2Q9ULQ0 834 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 PPP2R2CQ9Y2T4 447 aa16.05■□□□□ 0.16
LSM1-203ENST00000520755 KIF26AQ9ULI4 1882 aaPredicted RBP16.04■□□□□ 0.16
LSM1-203ENST00000520755 YJEFN3A6XGL0 299 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 E7ENQ6 273 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 FBXO21O94952 628 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 IPO7O95373 1038 aaKnown RBP16.04■□□□□ 0.16
LSM1-203ENST00000520755 CCDC175P0C221 793 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 ZDHHC11BP0C7U3 371 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 MYBL1P10243 752 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 ARHGAP25P42331 645 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 KRT83P78385 493 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 SLC6A3Q01959 620 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 ZNF268Q14587 947 aaPredicted RBP16.04■□□□□ 0.16
LSM1-203ENST00000520755 HS1BP3Q53T59 392 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 FAM78AQ5JUQ0 283 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 FAM102AQ5T9C2 384 aaPredicted RBP16.04■□□□□ 0.16
LSM1-203ENST00000520755 SLC26A9Q7LBE3 791 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 SCD5Q86SK9 330 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 ZDHHC14Q8IZN3 488 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 JOSD2Q8TAC2 188 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 TRIM11Q96F44 468 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 TRIM7Q9C029 511 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 OSER1Q9NX31 292 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 MYO1AQ9UBC5 1043 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 MYO10Q9HD67 2058 aa16.04■□□□□ 0.16
LSM1-203ENST00000520755 TRAV19A0A0A6YYK7 116 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 C19orf67A6NJJ6 358 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 USP27XA6NNY8 438 aa16.03■□□□□ 0.16
LSM1-203ENST00000520755 GRAP2O75791 330 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms