RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 KRT20P35900 424 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CENPAP49450 140 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ETV1P50549 477 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CDK9P50750 372 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 RAP1GDS1P52306 607 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 STX17P56962 302 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 PFKPQ01813 784 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 STRN3Q13033 797 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 GIT2Q14161 759 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 C16orf72Q14CZ0 275 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC39A14Q15043 492 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 NECTIN1Q15223 517 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ALFQ53S48 1182 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMEM201Q5SNT2 666 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 KLHDC10Q6PID8 442 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 RBM44Q6ZP01 1051 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 GK5Q6ZS86 529 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 RFPL4BQ6ZWI9 263 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CYP4V2Q6ZWL3 525 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 MIGA2Q7L4E1 593 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 FASTKD5Q7L8L6 764 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMPRSS7Q7RTY8 843 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 HAUS6Q7Z4H7 955 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ADAMTSL2Q86TH1 951 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CDR2LQ86X02 465 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC28AQ8IWP9 274 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRIM59Q8IWR1 403 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 PHACTR4Q8IZ21 702 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CADM3Q8N126 398 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 AHI1Q8N157 1196 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 VPS52Q8N1B4 723 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CCDC89Q8N998 374 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 PCYOX1LQ8NBM8 494 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 EXD1Q8NHP7 514 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 RFWD2Q8NHY2 731 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ABHD4Q8TB40 342 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 BAHD1Q8TBE0 780 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 UBLCP1Q8WVY7 318 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 HSPH1Q92598 858 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 NKD1Q969G9 470 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 REXO5Q96IC2 774 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 METTL2AQ96IZ6 378 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRICKLE1Q96MT3 831 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 C7orf26Q96N11 449 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 RPRD1AQ96P16 312 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 NOX5Q96PH1 765 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 VPS35Q96QK1 796 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TUBA1CQ9BQE3 449 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ERP44Q9BS26 406 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 SPON2Q9BUD6 331 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 APOL5Q9BWW9 433 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TBC1D10AQ9BXI6 508 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMEM168Q9H0V1 697 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 RAD21L1Q9H4I0 556 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLITRK6Q9H5Y7 841 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 C8orf33Q9H7E9 229 aaPredicted RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 NEK6Q9HC98 313 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 IL1RAPL2Q9NP60 686 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 CD93Q9NPY3 652 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCNQ5Q9NR82 932 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 NDE1Q9NXR1 346 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCTD5Q9NXV2 234 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 MRPL39Q9NYK5 338 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 LIMA1Q9UHB6 759 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 NUP50Q9UKX7 468 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 TMA7Q9Y2S6 64 aaKnown RBP5□□□□□ -1.61
HMGB1P19-201ENST00000517578 PCDHB14Q9Y5E9 798 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 STON1Q9Y6Q2 735 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ARHGEF10O15013 1369 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 ROBO2Q9HCK4 1378 aa5□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAST1Q9Y2H9 1570 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 WDR19Q8NEZ3 1342 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PCDH11XQ9BZA7 1347 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 NSD3Q9BZ95 1437 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 USP32Q8NFA0 1604 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ILVBLA1L0T0 632 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 GOLGA8JA6NMD2 632 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 C16orf96A6NNT2 1141 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 RSPH10B2B2RC85 870 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 NPIPB6E9PJ23 425 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 INO80B-WBP1J3KQ70 363 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SCAMP3O14828 347 aaKnown RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 POLR1CO15160 346 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 VILLO15195 856 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ACOX3O15254 700 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PDPK1O15530 556 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MAGEC1O60732 1142 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 DNAJA2O60884 412 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 JRKO75564 520 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 SEC24DO94855 1032 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 OLFM2O95897 454 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 HPXP02790 462 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 NTRK1P04629 796 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 RSPH10BP0C881 870 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 MED14OSP0DP75 135 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PCNAP12004 261 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 ITGAXP20702 1163 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 JAK1P23458 1154 aa4.99□□□□□ -1.61
HMGB1P19-201ENST00000517578 PSMA4P25789 261 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms