RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 ARHGAP45Q92619 1136 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 EVI5LQ96CN4 794 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 MFSD3Q96ES6 412 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 HIST1H2AHQ96KK5 128 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 HIST1H2AJQ99878 128 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 MYL10Q9BUA6 226 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 PITHD1Q9GZP4 211 aaPredicted RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 HAPLN2Q9GZV7 340 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 MTG2Q9H4K7 406 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 CERS4Q9HA82 394 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 ARGLU1Q9NWB6 273 aaPredicted RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 THG1LQ9NWX6 298 aaKnown RBP5.98□□□□□ -1.45
NUP54-218ENST00000515460 QPCTLQ9NXS2 382 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 MORF4L1Q9UBU8 362 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 DNAI1Q9UI46 699 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 TMEM98Q9Y2Y6 226 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 ARAP2Q8WZ64 1704 aa5.98□□□□□ -1.45
NUP54-218ENST00000515460 CFAP46Q8IYW2 2715 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 A0A0A6YYJ9 748 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 PNMA6EA0A0J9YXQ4 647 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 C2orf78A6NCI8 922 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 RTN3O95197 1032 aaPredicted RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 VSIG10L2P0DP72 767 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 ZNF24P17028 368 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 CYP2B6P20813 491 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 HOXA7P31268 230 aaPredicted RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 SCNN1GP51170 649 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 BACE1P56817 501 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 GSTO1P78417 241 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 KRT72Q14CN4 511 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 KBTBD12Q3ZCT8 623 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 PREPLQ4J6C6 727 aaPredicted RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 MAP3K21Q5TCX8 1036 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 Q6ZRM9 215 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 ADGRA1Q86SQ6 560 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 CLEC14AQ86T13 490 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 LDLRAD3Q86YD5 345 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 MFN1Q8IWA4 741 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 GSPT2Q8IYD1 628 aaKnown RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 NXPE1Q8N323 547 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 CCDC112Q8NEF3 446 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 OR2W6PQ8NHA6 318 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 SPATA18Q8TC71 538 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 BICD2Q8TD16 824 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 TGFBRAP1Q8WUH2 860 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 CHTF18Q8WVB6 975 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 TRIB2Q92519 343 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 USP6NLQ92738 828 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 GPHA2Q96T91 129 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 MPHOSPH6Q99547 160 aaKnown RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 MAK16Q9BXY0 300 aaKnown RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 POFUT1Q9H488 388 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 DNAJC18Q9H819 358 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 SLC28A3Q9HAS3 691 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 TXNRD2Q9NNW7 524 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 H2AFY2Q9P0M6 372 aaPredicted RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 SPATA7Q9P0W8 599 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 PI4KBQ9UBF8 816 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.97□□□□□ -1.45
NUP54-218ENST00000515460 LCMT1Q9UIC8 334 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 HERC5Q9UII4 1024 aaKnown RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 MRPL42Q9Y6G3 142 aaKnown RBP5.97□□□□□ -1.45
NUP54-218ENST00000515460 MYO9AB2RTY4 2548 aa5.97□□□□□ -1.45
NUP54-218ENST00000515460 IGF2RP11717 2491 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 EPOPA6NHQ4 379 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 ZNF891A8MT65 544 aaPredicted RBP5.96□□□□□ -1.46
NUP54-218ENST00000515460 CHUKO15111 745 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 AHCYL1O43865 530 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 CREB3O43889 395 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 OPHN1O60890 802 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 RTN2O75298 545 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 BCAR3O75815 825 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 FSBPO95073 299 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 MBD3O95983 291 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 JUNP05412 331 aaKnown RBP5.96□□□□□ -1.46
NUP54-218ENST00000515460 MYOGP15173 224 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 AVPR2P30518 371 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 POU5F1Q01860 360 aaKnown RBP5.96□□□□□ -1.46
NUP54-218ENST00000515460 POSTNQ15063 836 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 CCL14Q16627 93 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 ZSCAN23Q3MJ62 389 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 GPR158Q5T848 1215 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 KCNV1Q6PIU1 500 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 SYNE3Q6ZMZ3 975 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 SEPT14Q6ZU15 432 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 ESPNLQ6ZVH7 1005 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 MRGPRGQ86SM5 289 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 C11orf74Q86VG3 221 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 FOXP4Q8IVH2 680 aaPredicted RBP5.96□□□□□ -1.46
NUP54-218ENST00000515460 APLFQ8IW19 511 aaPredicted RBP5.96□□□□□ -1.46
NUP54-218ENST00000515460 PDILTQ8N807 584 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 GBP7Q8N8V2 638 aaPredicted RBP5.96□□□□□ -1.46
NUP54-218ENST00000515460 MIGA1Q8NAN2 632 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 NEK11Q8NG66 645 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 CTCFLQ8NI51 663 aaPredicted RBP5.96□□□□□ -1.46
NUP54-218ENST00000515460 KIAA1524Q8TCG1 905 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 FERMT2Q96AC1 680 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 FAM81BQ96LP2 452 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 TCF25Q9BQ70 676 aa5.96□□□□□ -1.46
NUP54-218ENST00000515460 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms