RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 VWA5AO00534 786 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 MAPK13O15264 365 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 IDH3BO43837 385 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 WFS1O76024 890 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 RGS20O76081 388 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ZCCHC18P0CG32 403 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 POLR2GP62487 172 aaKnown RBP eCLIP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 DSC3Q14574 896 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 NDUFAF5Q5TEU4 345 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 PEX26Q7Z412 305 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 DEFB132Q7Z7B7 95 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ARFGAP2Q8N6H7 521 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 MGARPQ8TDB4 240 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 BSNDQ8WZ55 320 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 IFT74Q96LB3 600 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ACCSQ96QU6 501 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 TMEM117Q9H0C3 514 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ISCUQ9H1K1 167 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 RNPEPL1Q9HAU8 725 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 CASS4Q9NQ75 786 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ABI2Q9NYB9 513 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 NKX1-2Q9UD57 310 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 SSC5DA1L4H1 1573 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 MGAMO43451 1857 aa7.76□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF233A6NK53 670 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ANKRD63C9JTQ0 380 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 PGRMC1O00264 195 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 PMM2O15305 246 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SLC16A4O15374 487 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 GNRH1P01148 92 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 HLA-DRAP01903 254 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 CAPN1P07384 714 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 KRT16P08779 473 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF3P17036 446 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ATF7P17544 494 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 CALB2P22676 271 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 GCLMP48507 274 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 POU5F1BQ06416 359 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF423Q2M1K9 1284 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 PLEKHG6Q3KR16 790 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SPDYAQ5MJ70 313 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 LDLRAD1Q5T700 205 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 KIAA1614Q5VZ46 1190 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SLC39A4Q6P5W5 647 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 MILR1Q7Z6M3 343 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 KIF2BQ8N4N8 673 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 TMEM161BQ8NDZ6 487 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 OR2W6PQ8NHA6 318 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ATG4CQ96DT6 458 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 METTL2AQ96IZ6 378 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 RMDN3Q96TC7 470 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 AGPAT1Q99943 283 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC28BQ9BUN5 200 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 DDX18Q9NVP1 670 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 NR2E1Q9Y466 385 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ADGRA3Q8IWK6 1321 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 DKC1O60832 514 aaKnown RBP eCLIP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 BAIAP3O94812 1187 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 CHRNB2P17787 502 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ABCB4P21439 1286 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SOX11P35716 441 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ARHGDIBP52566 201 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF135P52742 658 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 HADHBP55084 474 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 MLLT6P55198 1093 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 PEX3P56589 373 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 PSMC5P62195 406 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 TNNC1P63316 161 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 CDK18Q07002 472 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SEMA3AQ14563 771 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 TCEAL1Q15170 157 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 NBPF12Q5TAG4 269 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 RNF207Q6ZRF8 634 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SAMD7Q7Z3H4 446 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ADAT2Q7Z6V5 191 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SYCE1Q8N0S2 351 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ANKRD53Q8N9V6 530 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 C12orf50Q8NA57 414 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 XXYLT1Q8NBI6 393 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 RBBP8NLQ8NC74 664 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 LILRB4Q8NHJ6 448 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SEC14L1Q92503 715 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 SEMA4DQ92854 862 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 KREMEN1Q96MU8 473 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 VPS35Q96QK1 796 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 DHRS9Q9BPW9 319 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 DDX50Q9BQ39 737 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 KIFC3Q9BVG8 833 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 RNF38Q9H0F5 515 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 DDX47Q9H0S4 455 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 ECT2Q9H8V3 914 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 HACL1Q9UJ83 578 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 NOCTQ9UK39 431 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 COQ6Q9Y2Z9 468 aa7.75□□□□□ -1.17
PDLIM5-219ENST00000514743 OR5K4A6NMS3 321 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 E9PBE3 544 aa7.74□□□□□ -1.17
PDLIM5-219ENST00000514743 PFDN6O15212 129 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms