RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 NOS2P35228 1153 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 GJC1P36383 396 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 TUFMP49411 452 aaKnown RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 UBE3AQ05086 875 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 IFRD2Q12894 506 aaPredicted RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 HADHQ16836 314 aaKnown RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 C8orf74Q6P047 294 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 AADACL2Q6P093 401 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 DENND5BQ6ZUT9 1274 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 STKLD1Q8NE28 680 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 FAM172AQ8WUF8 416 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 CENPIQ92674 756 aaPredicted RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 NCAPGQ9BPX3 1015 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 AP1M1Q9BXS5 423 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 PARD6BQ9BYG5 372 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 NGRNQ9NPE2 291 aaKnown RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 STAP1Q9ULZ2 295 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 SCML2Q9UQR0 700 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 MYO7AQ13402 2215 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 RTN3O95197 1032 aaPredicted RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 RB1P06400 928 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 H2AFXP16104 143 aaPredicted RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 MIPP30301 263 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 SLC25A52Q3SY17 297 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 GLE1Q53GS7 698 aaKnown RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 DCAF6Q58WW2 860 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 SH3PXD2AQ5TCZ1 1133 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 BEND5Q7L4P6 421 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 TMC7Q7Z402 723 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 SPRED2Q7Z698 418 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 TDHQ8IZJ6 230 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 NT5C3BQ969T7 300 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 TCF25Q9BQ70 676 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 ADAM33Q9BZ11 813 aa20.59■□□□□ 0.89
SSBP2-218ENST00000514493 ALG13Q9NP73 1137 aaKnown RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 ARGLU1Q9NWB6 273 aaPredicted RBP20.59■□□□□ 0.89
SSBP2-218ENST00000514493 GOLGA6L10A0A0M3HER8 536 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 FAM92AA1XBS5 289 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 SEC24AO95486 1093 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 TFE3P19532 575 aaPredicted RBP20.58■□□□□ 0.89
SSBP2-218ENST00000514493 IL1R2P27930 398 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 SULT1E1P49888 294 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 HDAC4P56524 1084 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 OTUD1Q5VV17 481 aaPredicted RBP20.58■□□□□ 0.89
SSBP2-218ENST00000514493 FBXO38Q6PIJ6 1188 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 STRADAQ7RTN6 431 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 SPPL3Q8TCT6 385 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 SAMD11Q96NU1 681 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 PNKPQ96T60 521 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 TBCBQ99426 244 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 NPY6RQ99463 290 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 ENTPD7Q9NQZ7 604 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 COMMD8Q9NX08 183 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 RAB21Q9UL25 225 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 MAFFQ9ULX9 164 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 USP18Q9UMW8 372 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 YIPF1Q9Y548 306 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 IRAK3Q9Y616 596 aa20.58■□□□□ 0.89
SSBP2-218ENST00000514493 CAPN9O14815 690 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 KRT7P08729 469 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 CNPP09543 421 aaKnown RBP20.57■□□□□ 0.88
SSBP2-218ENST00000514493 CA8P35219 290 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 USP46P62068 366 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 RAB6CQ53S08 254 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 SYPL2Q5VXT5 272 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 BSPRYQ5W0U4 402 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 TXNRD3NBQ6F5E7 133 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 BNIPLQ7Z465 357 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 SLC13A5Q86YT5 568 aaPredicted RBP20.57■□□□□ 0.88
SSBP2-218ENST00000514493 EXD1Q8NHP7 514 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 GPR152Q8TDT2 470 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 POF1BQ8WVV4 589 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 PEBP4Q96S96 227 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 KRT12Q99456 494 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 LRRC1Q9BTT6 524 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 RAB6CQ9H0N0 254 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 TLR9Q9NR96 1032 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 DDX56Q9NY93 547 aaKnown RBP20.57■□□□□ 0.88
SSBP2-218ENST00000514493 RRN3Q9NYV6 651 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 NAALADL1Q9UQQ1 740 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 OBSL1O75147 1896 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 CHD7Q9P2D1 2997 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 CHD9Q3L8U1 2897 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 NCAM1P13591 858 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 ERVFC1P60507 584 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 YWHAGP61981 247 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSBP2-218ENST00000514493 WDR93Q6P2C0 686 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 CYP4V2Q6ZWL3 525 aaPredicted RBP20.57■□□□□ 0.88
SSBP2-218ENST00000514493 RUBCNQ92622 972 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 TGS1Q96RS0 853 aaKnown RBP20.57■□□□□ 0.88
SSBP2-218ENST00000514493 CYP4F11Q9HBI6 524 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 MTUS1Q9ULD2 1270 aa20.57■□□□□ 0.88
SSBP2-218ENST00000514493 ANAPC1Q9H1A4 1944 aa20.56■□□□□ 0.88
SSBP2-218ENST00000514493 ZRANB2O95218 330 aaKnown RBP eCLIP20.56■□□□□ 0.88
SSBP2-218ENST00000514493 CXCL14O95715 111 aa20.56■□□□□ 0.88
SSBP2-218ENST00000514493 TRUB2O95900 331 aaKnown RBP20.56■□□□□ 0.88
SSBP2-218ENST00000514493 KRT1P04264 644 aa20.56■□□□□ 0.88
SSBP2-218ENST00000514493 DNAJB1P25685 340 aa20.56■□□□□ 0.88
SSBP2-218ENST00000514493 YWHAQP27348 245 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms