RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 ACCSQ96QU6 501 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 XPO6Q96QU8 1125 aaKnown RBP11.62□□□□□ -0.55
DDX41-216ENST00000513562 KIF2CQ99661 725 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 GPR174Q9BXC1 333 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 ZNF518BQ9C0D4 1074 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 MIR1-1HGQ9H1L0 117 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 PRORYQ9H606 182 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 CCSER2Q9H7U1 834 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 INTS13Q9NVM9 706 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 MARK1Q9P0L2 795 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
DDX41-216ENST00000513562 R3HCC1Q9Y3T6 440 aaKnown RBP11.62□□□□□ -0.55
DDX41-216ENST00000513562 ACACAQ13085 2346 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 GOLGA8IPA6NC78 632 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 GOLGA8JA6NMD2 632 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 GOLGA8CPA6NN73 597 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 NEDD8-MDP1E9PL57 170 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 GREM1O60565 184 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 TACC1O75410 805 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 RTN3O95197 1032 aaPredicted RBP11.61□□□□□ -0.55
DDX41-216ENST00000513562 ZDHHC11BP0C7U3 371 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 TYRP14679 529 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 FUT11Q495W5 492 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 DCAF12L1Q5VU92 463 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 OR5B17Q8NGF7 314 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 ZSCAN31Q96LW9 406 aaPredicted RBP11.61□□□□□ -0.55
DDX41-216ENST00000513562 MRPL45Q9BRJ2 306 aaKnown RBP11.61□□□□□ -0.55
DDX41-216ENST00000513562 CBWD1Q9BRT8 395 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 TRIM9Q9C026 710 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 MKRN2Q9H000 416 aaKnown RBP11.61□□□□□ -0.55
DDX41-216ENST00000513562 MRPL44Q9H9J2 332 aaKnown RBP11.61□□□□□ -0.55
DDX41-216ENST00000513562 ITM2CQ9NQX7 267 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 SEL1LQ9UBV2 794 aa11.61□□□□□ -0.55
DDX41-216ENST00000513562 TCHHQ07283 1943 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 A0A1B0GVT2 93 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 METTL12A8MUP2 240 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 KCNJ18B7U540 433 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 WASH3PC4AMC7 463 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 TNFSF14O43557 240 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 IGLV3-19P01714 112 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 IRF1P10914 325 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 PTPN1P18031 435 aaKnown RBP11.6□□□□□ -0.55
DDX41-216ENST00000513562 ITPKBP27987 946 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 OXTRP30559 389 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 GNL1P36915 607 aaPredicted RBP11.6□□□□□ -0.55
DDX41-216ENST00000513562 DGKGP49619 791 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 TPMTP51580 245 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 STARD3Q14849 445 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 SUZ12Q15022 739 aaKnown RBP11.6□□□□□ -0.55
DDX41-216ENST00000513562 MCTP1Q6DN14 999 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 HTR3DQ70Z44 454 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 ZNF843Q8N446 348 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 RASSF8Q8NHQ8 419 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 SCAMP5Q8TAC9 235 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 MMS19Q96T76 1030 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 BBS2Q9BXC9 721 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 B3GNT5Q9BYG0 378 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 DPEP3Q9H4B8 488 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 IL37Q9NZH6 218 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 WDR35Q9P2L0 1181 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 CHORDC1Q9UHD1 332 aaPredicted RBP11.6□□□□□ -0.55
DDX41-216ENST00000513562 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX41-216ENST00000513562 RAI2Q9Y5P3 530 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 STON1Q9Y6Q2 735 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 GON4LQ3T8J9 2241 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 PI4KAP42356 2102 aa11.6□□□□□ -0.55
DDX41-216ENST00000513562 MYH11P35749 1972 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 FAM92AA1XBS5 289 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 CLDN5O00501 218 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 GCNT3O95395 438 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 TNNC2P02585 160 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 FAM163BP0C2L3 166 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 CISD3P0C7P0 127 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 HLA-EP13747 358 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 GAP43P17677 238 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 LONP1P36776 959 aaKnown RBP11.59□□□□□ -0.55
DDX41-216ENST00000513562 EIF2S3P41091 472 aaKnown RBP11.59□□□□□ -0.55
DDX41-216ENST00000513562 GRK6P43250 576 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 AFF3P51826 1226 aaKnown RBP11.59□□□□□ -0.55
DDX41-216ENST00000513562 CASP5P51878 434 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 ZNF132P52740 706 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 SLC5A3P53794 718 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 GRIN1Q05586 938 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 ENPP2Q13822 863 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 DUOXA2Q1HG44 320 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 KIF19Q2TAC6 998 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 DHRS13Q6UX07 377 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 TPGS1Q6ZTW0 290 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 DYMQ7RTS9 669 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 ZNF605Q86T29 641 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 GPD1LQ8N335 351 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 B3GALNT2Q8NCR0 500 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 OR6B3Q8NGW1 331 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 NXPE2Q96DL1 559 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 KCNK16Q96T55 309 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 OLFML3Q9NRN5 406 aa11.59□□□□□ -0.55
DDX41-216ENST00000513562 GMIPQ9P107 970 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms