RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 COL19A1Q14993 1142 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 CTC1Q2NKJ3 1217 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 BSPRYQ5W0U4 402 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 TRNP1Q6NT89 227 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 DCUN1D2Q6PH85 259 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 JOSD2Q8TAC2 188 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 FNIP1Q8TF40 1166 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 GOLGA1Q92805 767 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 FAM149B1Q96BN6 582 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 ZNF707Q96C28 371 aaPredicted RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 MCEEQ96PE7 176 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 SLC2A13Q96QE2 648 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 TRIM62Q9BVG3 475 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 NMUR1Q9HB89 426 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 POPDC2Q9HBU9 364 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 OSER1Q9NX31 292 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 DNMT3BQ9UBC3 853 aaKnown RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 GUCA1BQ9UMX6 200 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 ZNF840PA6NDX5 716 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 TADA3O75528 432 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 FLT3P36888 993 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 MATKP42679 507 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 NOP2P46087 812 aaKnown RBP13.12□□□□□ -0.31
PDPN-210ENST00000513143 OGDHQ02218 1023 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
PDPN-210ENST00000513143 ANKRD54Q6NXT1 300 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 TMEM150AQ86TG1 271 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 DEFB106AQ8N104 65 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 C17orf53Q8N3J3 647 aaPredicted RBP13.12□□□□□ -0.31
PDPN-210ENST00000513143 EMC1Q8N766 993 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 C12orf76Q8N812 135 aaPredicted RBP13.12□□□□□ -0.31
PDPN-210ENST00000513143 LEMD2Q8NC56 503 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 CORO1BQ9BR76 489 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 DDX23Q9BUQ8 820 aaKnown RBP13.12□□□□□ -0.31
PDPN-210ENST00000513143 TRIM7Q9C029 511 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 ASAH2Q9NR71 780 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 ABCC13Q9NSE7 274 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 HCFC1R1Q9NWW0 138 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDPN-210ENST00000513143 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 TRPM5Q9NZQ8 1165 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 ANAPC7Q9UJX3 599 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 PAXBP1Q9Y5B6 917 aa13.12□□□□□ -0.31
PDPN-210ENST00000513143 SZT2Q5T011 3432 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 MACROD2A1Z1Q3 448 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 MYO1FO00160 1098 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 DPYSL4O14531 572 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 BUB1O43683 1085 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 FGF19O95750 216 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 RHOP08100 348 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 PDGFRAP16234 1089 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 HOXB8P17481 243 aaPredicted RBP13.11□□□□□ -0.31
PDPN-210ENST00000513143 GPD1P21695 349 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 NOS2P35228 1153 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 ZNF143P52747 638 aaPredicted RBP13.11□□□□□ -0.31
PDPN-210ENST00000513143 IFI16Q16666 785 aaKnown RBP13.11□□□□□ -0.31
PDPN-210ENST00000513143 SYPL2Q5VXT5 272 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 BTBD8Q5XKL5 378 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 SYCE2Q6PIF2 218 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 GAREM2Q75VX8 874 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 Q7L0L9 218 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 ZNF276Q8N554 614 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 RXFP2Q8WXD0 754 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 SMG7Q92540 1137 aaKnown RBP13.11□□□□□ -0.31
PDPN-210ENST00000513143 EDEM1Q92611 657 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 NT5C3BQ969T7 300 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 PABPC5Q96DU9 382 aaKnown RBP13.11□□□□□ -0.31
PDPN-210ENST00000513143 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 CDX2Q99626 313 aaPredicted RBP13.11□□□□□ -0.31
PDPN-210ENST00000513143 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDPN-210ENST00000513143 CLEC1BQ9P126 229 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 IP6K2Q9UHH9 426 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 NAALADL1Q9UQQ1 740 aa13.11□□□□□ -0.31
PDPN-210ENST00000513143 CAPN9O14815 690 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 MOCS3O95396 460 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 RALAP11233 206 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 NCAM1P13591 858 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 RARGP13631 454 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 GABRR2P28476 465 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 CDC25CP30307 473 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 PTPN9P43378 593 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 TUBP50607 506 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 NAP1L1P55209 391 aaKnown RBP13.1□□□□□ -0.31
PDPN-210ENST00000513143 ZNF252P-AS1Q0IIN9 211 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 PIGHQ14442 188 aaPredicted RBP13.1□□□□□ -0.31
PDPN-210ENST00000513143 ACAP1Q15027 740 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 SLC25A52Q3SY17 297 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 CCDC14Q49A88 953 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
PDPN-210ENST00000513143 RARS2Q5T160 578 aaKnown RBP13.1□□□□□ -0.31
PDPN-210ENST00000513143 MSANTD2Q6P1R3 559 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms