RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 ZSWIM1Q9BR11 485 aa8.17□□□□□ -1.1
RFC1-214ENST00000512726 PDCL3Q9H2J4 239 aa8.17□□□□□ -1.1
RFC1-214ENST00000512726 GPR34Q9UPC5 381 aa8.17□□□□□ -1.1
RFC1-214ENST00000512726 TDRD9Q8NDG6 1382 aaKnown RBP8.17□□□□□ -1.1
RFC1-214ENST00000512726 A0A1W2PS29 197 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 PI4KAP2A4QPH2 592 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 LEFTY2O00292 366 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 MYCLP12524 364 aaPredicted RBP8.16□□□□□ -1.1
RFC1-214ENST00000512726 CD19P15391 556 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 ABCD3P28288 659 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 HTR7P34969 479 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 MSX2P35548 267 aaPredicted RBP8.16□□□□□ -1.1
RFC1-214ENST00000512726 POLD2P49005 469 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 EPHB4P54760 987 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 DRG2P55039 364 aaKnown RBP8.16□□□□□ -1.1
RFC1-214ENST00000512726 RPS7P62081 194 aaKnown RBP8.16□□□□□ -1.1
RFC1-214ENST00000512726 FPGSQ05932 587 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 GALNT2Q10471 571 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 ACOX1Q15067 660 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 TMEM196Q5HYL7 178 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 MICALCLQ6ZW33 695 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 FAM9BQ8IZU0 186 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 ANKRD44Q8N8A2 993 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 SNX19Q92543 992 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 REXO5Q96IC2 774 aaKnown RBP8.16□□□□□ -1.1
RFC1-214ENST00000512726 FAM84AQ96KN4 292 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 PAAF1Q9BRP4 392 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 MECRQ9BV79 373 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 VN1R3Q9BXE9 311 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 STEAP1Q9UHE8 339 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 SERTAD3Q9UJW9 196 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 RIMKLBQ9ULI2 386 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 CNPY2Q9Y2B0 182 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 SSX2IPQ9Y2D8 614 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 ZBTB1Q9Y2K1 713 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 SNX14Q9Y5W7 946 aa8.16□□□□□ -1.1
RFC1-214ENST00000512726 CCDC78A2IDD5 438 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 MYADML2A6NDP7 307 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 SLC38A8A6NNN8 435 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 SPTLC2O15270 562 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 NOBOXO60393 691 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 CBFA2T3O75081 653 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 TIPRLO75663 272 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 CSF1P09603 554 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 RAD52P43351 418 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 CCR9P51686 369 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 RNASE9P60153 205 aaKnown RBP8.15□□□□□ -1.1
RFC1-214ENST00000512726 ARF3P61204 181 aaPredicted RBP8.15□□□□□ -1.1
RFC1-214ENST00000512726 ARF1P84077 181 aaKnown RBP8.15□□□□□ -1.1
RFC1-214ENST00000512726 HHEXQ03014 270 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 FOXL1Q12952 345 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 TUBB3Q13509 450 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 ERV3-1Q14264 604 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 MEA1Q16626 185 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 VMACQ2NL98 169 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 ZNF484Q5JVG2 852 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 DEPDC1Q5TB30 811 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 FAM205BPQ63HN1 556 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 SLFN13Q68D06 897 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 R3HCC1LQ7Z5L2 792 aaKnown RBP8.15□□□□□ -1.1
RFC1-214ENST00000512726 ADGRG5Q8IZF4 528 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 C11orf44Q8N8P7 122 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 Q8NA96 180 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 TBC1D22AQ8WUA7 517 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 SLC22A17Q8WUG5 538 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 DCLRE1CQ96SD1 692 aaKnown RBP8.15□□□□□ -1.1
RFC1-214ENST00000512726 OSBPL9Q96SU4 736 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 C17orf80Q9BSJ5 609 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 PRDM13Q9H4Q3 707 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 HSF4Q9ULV5 492 aa8.15□□□□□ -1.1
RFC1-214ENST00000512726 WDR47O94967 919 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 APOBEC3AP31941 199 aaPredicted RBP8.14□□□□□ -1.11
RFC1-214ENST00000512726 PAFAH1B1P43034 410 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 TIRAPP58753 221 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 OCA2Q04671 838 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 MESP2Q0VG99 397 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 CD300EQ496F6 205 aaPredicted RBP8.14□□□□□ -1.11
RFC1-214ENST00000512726 NAIF1Q69YI7 327 aaPredicted RBP8.14□□□□□ -1.11
RFC1-214ENST00000512726 SYNE3Q6ZMZ3 975 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 PIK3AP1Q6ZUJ8 805 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 B4GALNT4Q76KP1 1039 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 KRT27Q7Z3Y8 459 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 NBPF11Q86T75 865 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 MAPKAPK5Q8IW41 473 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 IZUMO1Q8IYV9 350 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 FAM71DQ8N9W8 422 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 OVCA2Q8WZ82 227 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 MCRS1Q96EZ8 462 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 RBM17Q96I25 401 aaKnown RBP8.14□□□□□ -1.11
RFC1-214ENST00000512726 HAPLN3Q96S86 360 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 LMAN2LQ9H0V9 348 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 CCDC68Q9H2F9 335 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 PLEKHA2Q9HB19 425 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 CD320Q9NPF0 282 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 SMYD2Q9NRG4 433 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 FBXO28Q9NVF7 368 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 NKX1-2Q9UD57 310 aaPredicted RBP8.14□□□□□ -1.11
RFC1-214ENST00000512726 CNOT7Q9UIV1 285 aaKnown RBP8.14□□□□□ -1.11
RFC1-214ENST00000512726 KCNE5Q9UJ90 142 aa8.14□□□□□ -1.11
RFC1-214ENST00000512726 GXYLT2A0PJZ3 443 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms