RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 SIAH2O43255 324 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 TBX10O75333 385 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 PPFIA2O75334 1257 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 RNF8O76064 485 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 PYGMP11217 842 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 VDRP11473 427 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 ITGA4P13612 1032 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 CD58P19256 250 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 NR1D1P20393 614 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 HSD17B3P37058 310 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 CLCN3P51790 818 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 PLTPP55058 493 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 MYL6P60660 151 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 MRPS6P82932 125 aaKnown RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 MAMLD1Q13495 774 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 CAMK1Q14012 370 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 CCNG2Q16589 344 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 MARCH8Q5T0T0 291 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 DCAF12L1Q5VU92 463 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 SPOPLQ6IQ16 392 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 PDE12Q6L8Q7 609 aaKnown RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 KDM7AQ6ZMT4 941 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 MMS22LQ6ZRQ5 1243 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 EP400NLQ6ZTU2 488 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 HFE2Q6ZVN8 426 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 B4GALNT4Q76KP1 1039 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 GSTA5Q7RTV2 222 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 TMC3Q7Z5M5 1100 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 POLNQ7Z5Q5 900 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 PCGF5Q86SE9 256 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 DNAAF5Q86Y56 855 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 KDF1Q8NAX2 398 aaPredicted RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 SMRP1Q8NCR6 262 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 BEST2Q8NFU1 509 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 OR5B17Q8NGF7 314 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 SPPL3Q8TCT6 385 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 FNIP1Q8TF40 1166 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 ALG3Q92685 438 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 KRT35Q92764 455 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 OSBPL8Q9BZF1 889 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 ROPN1BQ9BZX4 212 aaPredicted RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 TRIM6Q9C030 488 aaPredicted RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 PABPC3Q9H361 631 aaKnown RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 CENPHQ9H3R5 247 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 ROPN1Q9HAT0 212 aaPredicted RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 APOBEC3GQ9HC16 384 aaKnown RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 NXF1Q9UBU9 619 aaKnown RBP9.95□□□□□ -0.82
MSH3-203ENST00000512531 EFR3BQ9Y2G0 817 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 CDY2AQ9Y6F7 541 aa9.95□□□□□ -0.82
MSH3-203ENST00000512531 ATG2AQ2TAZ0 1938 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ZBTB42B2RXF5 422 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 M0QZ92 97 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 AGPSO00116 658 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ZNF189O75820 626 aaPredicted RBP9.94□□□□□ -0.82
MSH3-203ENST00000512531 IL2RAP01589 272 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ITGB1P05556 798 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 WEE2P0C1S8 567 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 SETSIPP0DME0 302 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 RARGP13631 454 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 PTPN7P35236 360 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 PNPLA4P41247 253 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 TNFSF9P41273 254 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 GSCP56915 257 aaPredicted RBP9.94□□□□□ -0.82
MSH3-203ENST00000512531 SLC8A3P57103 927 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 MRPS25P82663 173 aaKnown RBP9.94□□□□□ -0.82
MSH3-203ENST00000512531 DLX2Q07687 328 aaPredicted RBP9.94□□□□□ -0.82
MSH3-203ENST00000512531 PTK6Q13882 451 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ZNF268Q14587 947 aaPredicted RBP9.94□□□□□ -0.82
MSH3-203ENST00000512531 WDR72Q3MJ13 1102 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 KRT71Q3SY84 523 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 NOTUMQ6P988 496 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ADAT2Q7Z6V5 191 aaKnown RBP9.94□□□□□ -0.82
MSH3-203ENST00000512531 PASD1Q8IV76 773 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ZNF295-AS1Q8N0V1 137 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 UBR7Q8N806 425 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 NIPA2Q8N8Q9 360 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 PRELID2Q8N945 189 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 DNAJB3Q8WWF6 145 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 C18orf8Q96DM3 657 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ZNF560Q96MR9 790 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 FAM129BQ96TA1 746 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 CDCA3Q99618 268 aaPredicted RBP9.94□□□□□ -0.82
MSH3-203ENST00000512531 TRIM31Q9BZY9 425 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 HAPLN2Q9GZV7 340 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 IRF2BPLQ9H1B7 796 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 PPCSQ9HAB8 311 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 TMBIM4Q9HC24 238 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ASNSD1Q9NWL6 643 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 ATP8A1Q9Y2Q0 1164 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 HRH3Q9Y5N1 445 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 TRPV2Q9Y5S1 764 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 CACNA1HO95180 2353 aa9.94□□□□□ -0.82
MSH3-203ENST00000512531 A0A087WZ62 844 aa9.93□□□□□ -0.82
MSH3-203ENST00000512531 SMIM35A0A1B0GVV1 85 aa9.93□□□□□ -0.82
MSH3-203ENST00000512531 A6NJY4 79 aa9.93□□□□□ -0.82
MSH3-203ENST00000512531 SIGLEC16A6NMB1 481 aa9.93□□□□□ -0.82
MSH3-203ENST00000512531 EBAG9O00559 213 aa9.93□□□□□ -0.82
MSH3-203ENST00000512531 RGS16O15492 202 aaPredicted RBP9.93□□□□□ -0.82
MSH3-203ENST00000512531 FAM189A1O60320 539 aa9.93□□□□□ -0.82
MSH3-203ENST00000512531 SHOX2O60902 331 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms