RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 PLA2G5P39877 138 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 GRIA3P42263 894 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 KRT17Q04695 432 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 ERCC6LQ2NKX8 1250 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 KRTAP15-1Q3LI76 137 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 COBLL1Q53SF7 1204 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 CCSAPQ6IQ19 270 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 ATF7IPQ6VMQ6 1270 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 ATRIPQ8WXE1 791 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 ATG4AQ8WYN0 398 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 RAPGEF4Q8WZA2 1011 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 APOL5Q9BWW9 433 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 RWDD1Q9H446 243 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 BABAM1Q9NWV8 329 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 ZSCAN32Q9NX65 697 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 MRPS17Q9Y2R5 130 aaKnown RBP8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 KIAA0232Q92628 1395 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 PLEKHG2Q9H7P9 1386 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 NPHP4O75161 1426 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 MST1RQ04912 1400 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 DLG5Q8TDM6 1919 aa8.17□□□□□ -1.1
TRAPPC11-206ENST00000509857 PIK3C2AO00443 1686 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 MGST3O14880 152 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 CCP110O43303 1012 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 TLR5O60602 858 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 HDAC1Q13547 482 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 EIF4A2Q14240 407 aaKnown RBP8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 TBCCQ15814 346 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 ZNF618Q5T7W0 954 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 ZDHHC24Q6UX98 284 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 SIMC1Q8NDZ2 872 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 NGDNQ8NEJ9 315 aaKnown RBP8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 BPIFB1Q8TDL5 484 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 KRTAP4-5Q9BYR2 181 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 SMC4Q9NTJ3 1288 aa8.16□□□□□ -1.1
TRAPPC11-206ENST00000509857 DCCP43146 1447 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 IGSF1Q8N6C5 1336 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 ANO9A1A5B4 782 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 ORC4O43929 436 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 URI1O94763 535 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 PDHA1P08559 390 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 TXNP10599 105 aaKnown RBP8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 PIK3CBP42338 1070 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 PDE6CP51160 858 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 HTRA4P83105 476 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 MAVSQ7Z434 540 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 SLC15A3Q8IY34 581 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 FTSJ3Q8IY81 847 aaKnown RBP8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 ZC3H10Q96K80 434 aaKnown RBP8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 PPP1R9BQ96SB3 815 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 ANP32EQ9BTT0 268 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 CHMP4AQ9BY43 222 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 DHX36Q9H2U1 1008 aaKnown RBP8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 SLITRK6Q9H5Y7 841 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 ARNT2Q9HBZ2 717 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 DKK3Q9UBP4 350 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 SH2B3Q9UQQ2 575 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 FAM50BQ9Y247 325 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 CDY1Q9Y6F8 540 aa8.15□□□□□ -1.1
TRAPPC11-206ENST00000509857 CACNA1FO60840 1977 aa8.15□□□□□ -1.11
TRAPPC11-206ENST00000509857 PEAK1Q9H792 1746 aa8.15□□□□□ -1.11
TRAPPC11-206ENST00000509857 LMTK3Q96Q04 1460 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 MAP3K19Q56UN5 1328 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 F8W8V4 182 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 SLC16A3O15427 465 aaKnown RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 NXPH3O95157 252 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 KRT18P05783 430 aaKnown RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 ELFN1P0C7U0 828 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 ZFXP17010 805 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 CLK3P49761 638 aaKnown RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 ATXN1P54253 815 aaKnown RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 CACNA2D1P54289 1103 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 BMPR2Q13873 1038 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 INSCQ1MX18 579 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 C11orf96Q7Z7L8 435 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 CAGE1Q8TC20 777 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 FRAT1Q92837 279 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 BRIP1Q9BX63 1249 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 API5Q9BZZ5 524 aaKnown RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 CHST8Q9H2A9 424 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 DNMT3BQ9UBC3 853 aaKnown RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 VIRMAQ69YN4 1812 aaKnown RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 RGPD8O14715 1765 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 KIF1AQ12756 1690 aa8.14□□□□□ -1.11
TRAPPC11-206ENST00000509857 MARF1Q9Y4F3 1742 aaKnown RBP8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 RHPN2P1A8MT19 583 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 CHL1O00533 1208 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 PMM2O15305 246 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 SP2Q02086 613 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 EIF2B5Q13144 721 aaKnown RBP8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 DAG1Q14118 895 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 RRS1Q15050 365 aaKnown RBP8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 NPY5RQ15761 445 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 CCAR1Q8IX12 1150 aaKnown RBP8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 KCNH5Q8NCM2 988 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 DUSP26Q9BV47 211 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 STK31Q9BXU1 1019 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 INSL6Q9Y581 213 aa8.13□□□□□ -1.11
TRAPPC11-206ENST00000509857 ENTPD2Q9Y5L3 495 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms