RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 AASDHQ4L235 1098 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 KRT39Q6A163 491 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 FMR1NBQ8N0W7 255 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 C12orf50Q8NA57 414 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 SEMA4DQ92854 862 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 NACA2Q9H009 215 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 SMOC1Q9H4F8 434 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 SPHK2Q9NRA0 654 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 PCDHA5Q9Y5H7 936 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 CEP295Q9C0D2 2601 aa13.73□□□□□ -0.21
HMGCS1-205ENST00000508319 TNRC6BQ9UPQ9 1833 aaKnown RBP13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 ADAM23O75077 832 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 TULP3O75386 442 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 ACO1P21399 889 aaKnown RBP13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 TIE1P35590 1138 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 KIF11P52732 1056 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 LIMK1P53667 647 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 GAD2Q05329 585 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 HSF5Q4G112 596 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 PPP1R26Q5T8A7 1209 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 EMC10Q5UCC4 262 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 PMS2CLQ68D20 193 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 TCEAL6Q6IPX3 200 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 HTR3DQ70Z44 454 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 TMEM25Q86YD3 366 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 TXNDC5Q8NBS9 432 aaKnown RBP13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 OLIG1Q8TAK6 271 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 TCEAL3Q969E4 200 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 ARID3AQ99856 593 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 KLF16Q9BXK1 252 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 NMUR1Q9HB89 426 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 ZDHHC4Q9NPG8 344 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 INVSQ9Y283 1065 aa13.72□□□□□ -0.21
HMGCS1-205ENST00000508319 MAP1BP46821 2468 aaKnown RBP13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 A0A1W2PQH9 124 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 MDM4O15151 490 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 BCKDHBP21953 392 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 GBP1P32455 592 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 PRCPP42785 496 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 PPM1JQ5JR12 505 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 KLHDC10Q6PID8 442 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 ZC3H3Q8IXZ2 948 aaKnown RBP13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 NAT16Q8N8M0 369 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 TERB1Q8NA31 727 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 CCDC150Q8NCX0 1101 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 FBXL13Q8NEE6 735 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 CCDC34Q96HJ3 373 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 FAXDC2Q96IV6 333 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 DUSP16Q9BY84 665 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 VPS45Q9NRW7 570 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 NUDT5Q9UKK9 219 aa13.71□□□□□ -0.21
HMGCS1-205ENST00000508319 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 GON4LQ3T8J9 2241 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 BCLAF3A2AJT9 711 aaKnown RBP13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 TRIM24O15164 1050 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 CETN3O15182 167 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 SLC16A3O15427 465 aaKnown RBP13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 CACNG3O60359 315 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 RHOBTB1O94844 696 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 ADRB1P08588 477 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 EPB41P11171 864 aaKnown RBP13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 RARGP13631 454 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 ATP5C1P36542 298 aaKnown RBP13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 TNFRSF4P43489 277 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 CREB5Q02930 508 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 ANO4Q32M45 955 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 ZNF394Q53GI3 561 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 EOGTQ5NDL2 527 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 ZNF658Q5TYW1 1059 aaPredicted RBP13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 BTBD8Q5XKL5 378 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 CCDC186Q7Z3E2 898 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 SCD5Q86SK9 330 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 C11orf74Q86VG3 221 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 SLC4A11Q8NBS3 891 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 ENGASEQ8NFI3 743 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 SPATA20Q8TB22 786 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 CISHQ9NSE2 258 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 RAB20Q9NX57 234 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 MARK1Q9P0L2 795 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 DEC1Q9P2X7 70 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 HCN2Q9UL51 889 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 USP3Q9Y6I4 520 aa13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 KMT2BQ9UMN6 2715 aaPredicted RBP13.7□□□□□ -0.22
HMGCS1-205ENST00000508319 TBC1D3BA6NDS4 549 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 NEDD8-MDP1E9PL57 170 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 TM4SF5O14894 197 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 ALDH1A2O94788 518 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 PMS1P54277 932 aaKnown RBP13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 RAD23BP54727 409 aa13.69□□□□□ -0.22
HMGCS1-205ENST00000508319 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms