RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 RFX6Q8HWS3 928 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PASD1Q8IV76 773 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 NUDCD3Q8IVD9 361 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAP7D3Q8IWC1 876 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ULK2Q8IYT8 1036 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ALDH16A1Q8IZ83 802 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF276Q8N554 614 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 DRAXINQ8NBI3 349 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 KCTD6Q8NC69 237 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 DEPTORQ8TB45 409 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACTL9Q8TC94 416 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACMSDQ8TDX5 336 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PPP4R1Q8TF05 950 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM151AQ8WW52 585 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SREK1Q8WXA9 508 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 LPAR1Q92633 364 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ATP2A3Q93084 1043 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 HAUS1Q96CS2 278 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 OPTNQ96CV9 577 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 CMTM5Q96DZ9 223 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 MRRFQ96E11 262 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 MASTLQ96GX5 879 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 CEP170P1Q96L14 293 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RILPQ96NA2 401 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM111AQ96PZ2 611 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 BTBD9Q96Q07 612 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SRPK1Q96SB4 655 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM118BQ9BPY3 351 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMEM121Q9BTD3 319 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PI4K2AQ9BTU6 479 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SPATA16Q9BXB7 569 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 KLHL4Q9C0H6 718 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 NIF3L1Q9GZT8 377 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 EPB41L1Q9H4G0 881 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 IFT122Q9HBG6 1241 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 GPRC5CQ9NQ84 441 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 THAP1Q9NVV9 213 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ASNSD1Q9NWL6 643 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RBAKQ9NYW8 714 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 CNTN3Q9P232 1028 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PAK5Q9P286 719 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ARHGAP28Q9P2N2 729 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 KANSL3Q9P2N6 904 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC17A7Q9P2U7 560 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PPARGC1AQ9UBK2 798 aaKnown RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC9A2Q9UBY0 812 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 CIDEBQ9UHD4 219 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNRF3Q9ULT6 936 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 PLLPQ9Y342 182 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 LY75O60449 1722 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RGPD3A6NKT7 1758 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 RGPD4Q7Z3J3 1758 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 SIPA1L1O43166 1804 aa5.16□□□□□ -1.58
HMGB3P16-201ENST00000508037 TCRBV5S1A1TA0A578 114 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CAPN14A8MX76 684 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 TRIM49D1C9J1S8 452 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 GOLGA8SH3BPF8 625 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 H3BRJ5 948 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 GOLGA8MH3BSY2 632 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 WDR46O15213 610 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 STRNO43815 780 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ATP9BO43861 1147 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCNT2O60583 730 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CST8O60676 142 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 OPHN1O60890 802 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 RNF8O76064 485 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ENO1P06733 434 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ADH1AP07327 375 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ASNSP08243 561 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 PABPC4LP0CB38 370 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZSCAN5DPP0CG00 497 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 KRT3P12035 628 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ETS1P14921 441 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 AOC1P19801 751 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 GRK2P25098 689 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CRHR1P34998 444 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CAP2P40123 477 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 RGS2P41220 211 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ELK3P41970 407 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 NAMPTP43490 491 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 HSPA13P48723 471 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 TUBP50607 506 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 COPAP53621 1224 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CACNB3P54284 484 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 BASP1P80723 227 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 OTUD4Q01804 1114 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CNTN2Q02246 1040 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAAP100Q0VG06 881 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 STX3Q13277 289 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 NCOA4Q13772 614 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 DPYSL3Q14195 570 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 KCNJ11Q14654 390 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 PDK2Q15119 407 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 PGM5Q15124 567 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 WDR72Q3MJ13 1102 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 XKR3Q5GH77 459 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CFAP157Q5JU67 520 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 HP1BP3Q5SSJ5 553 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FNBP1LQ5T0N5 605 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms