RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 HOXC11O43248 304 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 RHOBTB1O94844 696 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 KLF8O95600 359 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 KIR2DL1P43626 348 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 BECN1Q14457 450 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 ANO4Q32M45 955 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 HSF5Q4G112 596 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 AASDHQ4L235 1098 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 USP39Q53GS9 565 aaKnown RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 PPP1R26Q5T8A7 1209 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 ZNF658Q5TYW1 1059 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 ANO7Q6IWH7 933 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 RASSF3Q86WH2 238 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 ETFBKMTQ8IXQ9 262 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 PHTF2Q8N3S3 785 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 C12orf50Q8NA57 414 aaPredicted RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 IL17RCQ8NAC3 791 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 TXNDC5Q8NBS9 432 aaKnown RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 HEXIM2Q96MH2 286 aaKnown RBP21.96■■□□□ 1.11
CLDND1-216ENST00000507944 GSDMAQ96QA5 445 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 TPSD1Q9BZJ3 242 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 NMUR1Q9HB89 426 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 RAB20Q9NX57 234 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 INVSQ9Y283 1065 aa21.96■■□□□ 1.11
CLDND1-216ENST00000507944 A0A1W2PQH9 124 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 TBC1D3BA6NDS4 549 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 GREM1O60565 184 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 CHRM1P11229 460 aaPredicted RBP21.95■■□□□ 1.1
CLDND1-216ENST00000507944 RARGP13631 454 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 GBP1P32455 592 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 KIF11P52732 1056 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 PREPLQ4J6C6 727 aaPredicted RBP21.95■■□□□ 1.1
CLDND1-216ENST00000507944 PLA2G2CQ5R387 149 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 TMEM92Q6UXU6 159 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 TTC30AQ86WT1 665 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 TTC39CQ8N584 583 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 ENGASEQ8NFI3 743 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 CNOT6LQ96LI5 555 aaKnown RBP21.95■■□□□ 1.1
CLDND1-216ENST00000507944 TSG101Q99816 390 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 CISHQ9NSE2 258 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 DEC1Q9P2X7 70 aa21.95■■□□□ 1.1
CLDND1-216ENST00000507944 NUP205Q92621 2012 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 SGK1O00141 431 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 TULP3O75386 442 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 ALDH1A2O94788 518 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 SMC2O95347 1197 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 HNRNPLP14866 589 aaKnown RBP eCLIP21.94■■□□□ 1.1
CLDND1-216ENST00000507944 MPLP40238 635 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 NUCB2P80303 420 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 GOLGA8FQ08AF8 430 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 GOLGA8DPQ0D2H9 430 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 COBLL1Q53SF7 1204 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 EOGTQ5NDL2 527 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 TCERG1LQ5VWI1 586 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 KLHDC10Q6PID8 442 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 MDGA1Q8NFP4 955 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 TATDN2Q93075 761 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.94■■□□□ 1.1
CLDND1-216ENST00000507944 NUDT5Q9UKK9 219 aa21.94■■□□□ 1.1
CLDND1-216ENST00000507944 PLA2G4AP47712 749 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 PSEN1P49768 467 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 FKBP3Q00688 224 aaKnown RBP21.93■■□□□ 1.1
CLDND1-216ENST00000507944 C10orf120Q5SQS8 335 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 ANKRD40Q6AI12 368 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 NUDT18Q6ZVK8 323 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 CCDC186Q7Z3E2 898 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 SCD5Q86SK9 330 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 C11orf74Q86VG3 221 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 SLC4A11Q8NBS3 891 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 SPATA20Q8TB22 786 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 ERCC4Q92889 916 aaPredicted RBP21.93■■□□□ 1.1
CLDND1-216ENST00000507944 SMARCE1Q969G3 411 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 TMEM176AQ96HP8 235 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 SMOC1Q9H4F8 434 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 POLMQ9NP87 494 aaPredicted RBP21.93■■□□□ 1.1
CLDND1-216ENST00000507944 ZDHHC4Q9NPG8 344 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 VPS45Q9NRW7 570 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 DNMT3LQ9UJW3 386 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 NAGPAQ9UK23 515 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 LSM7Q9UK45 103 aaKnown RBP21.93■■□□□ 1.1
CLDND1-216ENST00000507944 USP3Q9Y6I4 520 aa21.93■■□□□ 1.1
CLDND1-216ENST00000507944 MDM4O15151 490 aa21.92■■□□□ 1.1
CLDND1-216ENST00000507944 SLC16A3O15427 465 aaKnown RBP21.92■■□□□ 1.1
CLDND1-216ENST00000507944 LIMK1P53667 647 aa21.92■■□□□ 1.1
CLDND1-216ENST00000507944 PMS1P54277 932 aaKnown RBP21.92■■□□□ 1.1
CLDND1-216ENST00000507944 RAD23BP54727 409 aa21.92■■□□□ 1.1
CLDND1-216ENST00000507944 CREB5Q02930 508 aa21.92■■□□□ 1.1
CLDND1-216ENST00000507944 DCAF17Q5H9S7 520 aaPredicted RBP21.92■■□□□ 1.1
CLDND1-216ENST00000507944 ZC3H3Q8IXZ2 948 aaKnown RBP21.92■■□□□ 1.1
CLDND1-216ENST00000507944 ARID3AQ99856 593 aa21.92■■□□□ 1.1
CLDND1-216ENST00000507944 FAM124BQ9H5Z6 455 aaPredicted RBP21.92■■□□□ 1.1
CLDND1-216ENST00000507944 RXFP3Q9NSD7 469 aa21.92■■□□□ 1.1
CLDND1-216ENST00000507944 BCLAF3A2AJT9 711 aaKnown RBP21.91■■□□□ 1.1
CLDND1-216ENST00000507944 TRIM24O15164 1050 aa21.91■■□□□ 1.1
CLDND1-216ENST00000507944 ADAM23O75077 832 aa21.91■■□□□ 1.1
CLDND1-216ENST00000507944 RALAP11233 206 aa21.91■■□□□ 1.1
CLDND1-216ENST00000507944 CBWD6Q4V339 395 aa21.91■■□□□ 1.1
CLDND1-216ENST00000507944 CBWD3Q5JTY5 395 aa21.91■■□□□ 1.1
CLDND1-216ENST00000507944 CBWD5Q5RIA9 395 aa21.91■■□□□ 1.1
CLDND1-216ENST00000507944 C10orf76Q5T2E6 689 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms