RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CLEC20AQ6ZU45 233 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 FAM186BQ8IYM0 893 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 TERB1Q8NA31 727 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 TAS1R2Q8TE23 839 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 HMGB4Q8WW32 186 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 HNRNPABQ99729 332 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 DUSP9Q99956 384 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 LSM14BQ9BX40 385 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 KLF16Q9BXK1 252 aaPredicted RBP12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 IMPG2Q9BZV3 1241 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 CYLDQ9NQC7 956 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 OSER1Q9NX31 292 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 DEC1Q9P2X7 70 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 ADAMTS9Q9P2N4 1935 aa12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 CNOT1A5YKK6 2376 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-204ENST00000507293 FAM237AA0A1B0GTK4 181 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 C4orf47A7E2U8 309 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 PATE3B3GLJ2 98 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 KHNYNO15037 678 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 MDM4O15151 490 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 TRIM24O15164 1050 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 TBX18O95935 607 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 KRT13P13646 458 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 CD58P19256 250 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 TRIM21P19474 475 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 ACO1P21399 889 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 P2RY2P41231 377 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 DPYDQ12882 1025 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 PREPLQ4J6C6 727 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 C10orf76Q5T2E6 689 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 KRBA2Q6ZNG9 492 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 INTS8Q75QN2 995 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 ARMCX6Q7L4S7 300 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 PGBD3Q8N328 593 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 FRMD1Q8N878 549 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 ZNF513Q8N8E2 541 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 PIGKQ92643 395 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 CYFIP2Q96F07 1278 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 SPACA7Q96KW9 195 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 NT5C1AQ9BXI3 368 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 NIF3L1Q9GZT8 377 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 NMUR1Q9HB89 426 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 PCDHA5Q9Y5H7 936 aa12.18□□□□□ -0.46
HMGCS1-204ENST00000507293 TPRP12270 2363 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 A0A1W2PQH9 124 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 NEDD8-MDP1E9PL57 170 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 GREM1O60565 184 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 CILPO75339 1184 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 KCNK5O95279 499 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 RPL13P26373 211 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 PMLP29590 882 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 PSMC2P35998 433 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 ATP5C1P36542 298 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 WASP42768 502 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 MAP7D1Q3KQU3 841 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 GRAMD4Q6IC98 578 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 PSAPL1Q6NUJ1 521 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 HTR3DQ70Z44 454 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 LPCAT2Q7L5N7 544 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 TRMT11Q7Z4G4 463 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 TMEFF1Q8IYR6 380 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 GUF1Q8N442 669 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 KCNV2Q8TDN2 545 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 BBS2Q9BXC9 721 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 PNPLA8Q9NP80 782 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 MBD1Q9UIS9 605 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 LSM7Q9UK45 103 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 NUDT5Q9UKK9 219 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 ANGPTL2Q9UKU9 493 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 HCN2Q9UL51 889 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 PI4KAP42356 2102 aa12.17□□□□□ -0.46
HMGCS1-204ENST00000507293 ATXN2Q99700 1313 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 ACACBO00763 2458 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 A0A1W2PQ27 194 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 A0A1W2PQ64 194 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 A0A1W2PQD8 194 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 MAP3K13O43283 966 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 CACNG3O60359 315 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 KRT37O76014 449 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 RARGP13631 454 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 HOXB2P14652 356 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 TYRP14679 529 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 GABRG2P18507 467 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 NOVA1P51513 510 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 IRX4P78413 519 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 ENPEPQ07075 957 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 ADAM9Q13443 819 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 BYSLQ13895 437 aaKnown RBP12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 ZCWPW2Q504Y3 356 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 ZNF394Q53GI3 561 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 EGFLAMQ63HQ2 1017 aa12.16□□□□□ -0.46
HMGCS1-204ENST00000507293 TPGS1Q6ZTW0 290 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms