RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 DAAM1Q9Y4D1 1078 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 PIAS3Q9Y6X2 628 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 OBSL1O75147 1896 aa17.75■□□□□ 0.43
SYNE4-207ENST00000505054 A0A1W2PQC6 194 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 PRAMEF12O95522 483 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 ZDHHC11BP0C7U3 371 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 DDX6P26196 483 aaKnown RBP eCLIP17.74■□□□□ 0.43
SYNE4-207ENST00000505054 GDI1P31150 447 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 VIPR2P41587 438 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 SLC8A3P57103 927 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 MEA1Q16626 185 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 LAIR1Q6GTX8 287 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 ARID3BQ8IVW6 561 aaPredicted RBP17.74■□□□□ 0.43
SYNE4-207ENST00000505054 CMTM8Q8IZV2 173 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 SLC35F5Q8WV83 523 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 OVCA2Q8WZ82 227 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 SLC22A12Q96S37 553 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 SMG9Q9H0W8 520 aaKnown RBP17.74■□□□□ 0.43
SYNE4-207ENST00000505054 FBXO44Q9H4M3 255 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 TRPC7Q9HCX4 862 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 SCML2Q9UQR0 700 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 USP3Q9Y6I4 520 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 SPTBN2O15020 2390 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 RALGAPA1Q6GYQ0 2036 aa17.74■□□□□ 0.43
SYNE4-207ENST00000505054 SOBPA7XYQ1 873 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 MED7O43513 233 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 GABBR2O75899 941 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 TGM1P22735 817 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 WEE1P30291 646 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 PPP3CCP48454 512 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 PTK2Q05397 1052 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 CCDC186Q7Z3E2 898 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 GPIHBP1Q8IV16 184 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 MSANTD3Q96H12 275 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 PARD6AQ9NPB6 346 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 CHORDC1Q9UHD1 332 aaPredicted RBP17.73■□□□□ 0.43
SYNE4-207ENST00000505054 ZMYM5Q9UJ78 669 aa17.73■□□□□ 0.43
SYNE4-207ENST00000505054 TPRP12270 2363 aaKnown RBP17.73■□□□□ 0.43
SYNE4-207ENST00000505054 ZNF263O14978 683 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 OAS1P00973 400 aaKnown RBP17.72■□□□□ 0.43
SYNE4-207ENST00000505054 CYP11B1P15538 503 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 SOX5P35711 763 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 PBX1P40424 430 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 GPD2P43304 727 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 RGS7P49802 495 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 UBASH3AP57075 661 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 SNX30Q5VWJ9 437 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 PMF1Q6P1K2 205 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 C1orf228Q6PIY5 440 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 MFSD6LQ8IWD5 586 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 CELF5Q8N6W0 485 aaKnown RBP17.72■□□□□ 0.43
SYNE4-207ENST00000505054 KCTD13Q8WZ19 329 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 E2F7Q96AV8 911 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 CNTNAP3BQ96NU0 1288 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 LRRC3BQ96PB8 259 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 SPAG5Q96R06 1193 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 CYP2S1Q96SQ9 504 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 CNTNAP3Q9BZ76 1288 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 LMAN1LQ9HAT1 526 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 NMUR1Q9HB89 426 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 IFNKQ9P0W0 207 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 CYTH4Q9UIA0 394 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 PCDHGC3Q9UN70 934 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 CCL26Q9Y258 94 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 EPG5Q9HCE0 2579 aa17.72■□□□□ 0.43
SYNE4-207ENST00000505054 KIF26AQ9ULI4 1882 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-207ENST00000505054 TRAV19A0A0A6YYK7 116 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 A0A1W2PQH9 124 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 ARNTLO00327 626 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 LRP3O75074 770 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 GFPT2O94808 682 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 OLFM2O95897 454 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 ABL1P00519 1130 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 USP17L7P0C7H9 530 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 AVPR1AP37288 418 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 TKTL1P51854 596 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 MLLT6P55198 1093 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-207ENST00000505054 BPIFB4P59827 614 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 ADIGQ0VDE8 80 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 BHLHA9Q7RTU4 235 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 NOP9Q86U38 636 aaKnown RBP17.71■□□□□ 0.43
SYNE4-207ENST00000505054 ARL14EPQ8N8R7 260 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-207ENST00000505054 RIN3Q8TB24 985 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 DDX1Q92499 740 aaKnown RBP17.71■□□□□ 0.43
SYNE4-207ENST00000505054 USP13Q92995 863 aaPredicted RBP17.71■□□□□ 0.43
SYNE4-207ENST00000505054 ULBP1Q9BZM6 244 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 OSER1Q9NX31 292 aa17.71■□□□□ 0.43
SYNE4-207ENST00000505054 ZNF638Q14966 1978 aaKnown RBP17.71■□□□□ 0.43
SYNE4-207ENST00000505054 DENND4CQ5VZ89 1909 aa17.7■□□□□ 0.42
SYNE4-207ENST00000505054 ACACBO00763 2458 aa17.7■□□□□ 0.42
SYNE4-207ENST00000505054 KMT2BQ9UMN6 2715 aaPredicted RBP17.7■□□□□ 0.42
SYNE4-207ENST00000505054 HEPACAM2A8MVW5 462 aa17.7■□□□□ 0.42
SYNE4-207ENST00000505054 CKMP06732 381 aa17.7■□□□□ 0.42
SYNE4-207ENST00000505054 STAT1P42224 750 aa17.7■□□□□ 0.42
SYNE4-207ENST00000505054 RPL34P49207 117 aaKnown RBP17.7■□□□□ 0.42
SYNE4-207ENST00000505054 LRRC32Q14392 662 aa17.7■□□□□ 0.42
SYNE4-207ENST00000505054 PM20D1Q6GTS8 502 aa17.7■□□□□ 0.42
SYNE4-207ENST00000505054 PASD1Q8IV76 773 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms