RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 HAPLN1P10915 354 aaPredicted RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 CHRNA3P32297 505 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 GBP1P32455 592 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 MARCKSL1P49006 195 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 PSEN1P49768 467 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 CACNA2D1P54289 1103 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 SLC25A11Q02978 314 aaKnown RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 LMNB2Q03252 620 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 SMC1AQ14683 1233 aaKnown RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 CCNG2Q16589 344 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 ATP13A4Q4VNC1 1196 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 DCAF6Q58WW2 860 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 RTP2Q5QGT7 225 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 ZFYVE27Q5T4F4 411 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 BSPRYQ5W0U4 402 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 WDR93Q6P2C0 686 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 BNIPLQ7Z465 357 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 CPNE8Q86YQ8 564 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 ZNF276Q8N554 614 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 EIF1ADQ8N9N8 165 aaKnown RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 TTC13Q8NBP0 860 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 NOA1Q8NC60 698 aaKnown RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 FAM71BQ8TC56 605 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 CLEC4CQ8WTT0 213 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 FAM172AQ8WUF8 416 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 RIN2Q8WYP3 895 aaPredicted RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 PIWIL1Q96J94 861 aaKnown RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 LRRC1Q9BTT6 524 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 HERC2P3Q9BVR0 1158 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 AP1M1Q9BXS5 423 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 FRMD8P1Q9BZ68 369 aaPredicted RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 LRRC19Q9H756 370 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 CERS4Q9HA82 394 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 TMEM30AQ9NV96 361 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 ABI2Q9NYB9 513 aaPredicted RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 PCYOX1Q9UHG3 505 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 SCML2Q9UQR0 700 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 PCDHA11Q9Y5I1 949 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 MRPL42Q9Y6G3 142 aaKnown RBP10.59□□□□□ -0.71
DDX41-203ENST00000504781 UNC80Q8N2C7 3258 aa10.59□□□□□ -0.71
DDX41-203ENST00000504781 TSC2P49815 1807 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 FAM92AA1XBS5 289 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 FAM187AA6NFU0 413 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 C3orf70A6NLC5 250 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 YJEFN3A6XGL0 299 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 E7ENQ6 273 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 C1RP00736 705 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 FYNP06241 537 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 OR4Q2P0C623 313 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 CPB1P15086 417 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 ATF2P15336 505 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 OR1D2P34982 312 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 CDKN2BP42772 138 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 GLUD2P49448 558 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 ARSEP51690 589 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 ZNF135P52742 658 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 DRG2P55039 364 aaKnown RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 HDAC4P56524 1084 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 ATP11AP98196 1134 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 C2orf54Q08AI8 447 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 RAB33AQ14088 237 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 DHX34Q14147 1143 aaKnown RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 TFDP2Q14188 446 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 ADGRE1Q14246 886 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 BRD3Q15059 726 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 PSMD5Q16401 504 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 CCDC142Q17RM4 750 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 C15orf59Q2T9L4 293 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 FAM117BQ6P1L5 589 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 SCYL2Q6P3W7 929 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 DRICH1Q6PGQ1 229 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 SPOCD1Q6ZMY3 1216 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 RNF19BQ6ZMZ0 732 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 TMEM173Q86WV6 379 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 CCDC50Q8IVM0 306 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 HERC6Q8IVU3 1022 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 SCN4BQ8IWT1 228 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 C12orf50Q8NA57 414 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 ATAD1Q8NBU5 361 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 BCL7CQ8WUZ0 217 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 HNRNPLLQ8WVV9 542 aaKnown RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.58□□□□□ -0.72
DDX41-203ENST00000504781 ANKRD7Q92527 254 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 RAPGEF5Q92565 580 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 MAGOHBQ96A72 148 aaKnown RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 RNF25Q96BH1 459 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 SLITRK1Q96PX8 696 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 KRT12Q99456 494 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 CLSTN3Q9BQT9 956 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 MAK16Q9BXY0 300 aaKnown RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 ANKZF1Q9H8Y5 726 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 ZWILCHQ9H900 591 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 NGRNQ9NPE2 291 aaKnown RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 MRPL17Q9NRX2 175 aaKnown RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 ARGLU1Q9NWB6 273 aaPredicted RBP10.58□□□□□ -0.72
DDX41-203ENST00000504781 HCSTQ9UBK5 93 aa10.58□□□□□ -0.72
DDX41-203ENST00000504781 AFF4Q9UHB7 1163 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms