RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CTDP1Q9Y5B0 961 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 PCDHGB5Q9Y5G0 923 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 SCN4AP35499 1836 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 TRIM64CA6NLI5 447 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 TRIM49D1C9J1S8 452 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 H3BNH8 94 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 GOLGA8SH3BPF8 625 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 GOLGA8MH3BSY2 632 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 MSH4O15457 936 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.264e-14■■■■■ 46.5
VEGFA-215ENST00000497139 TTKP33981 857 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 CRHR1P34998 444 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 C21orf59P57076 290 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 TFDP3Q5H9I0 405 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 DENND5BQ6ZUT9 1274 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 PPP4R1Q8TF05 950 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 PLEKHA8Q96JA3 519 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 NACC1Q96RE7 527 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 UIMC1Q96RL1 719 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 OSBPL11Q9BXB4 747 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 RTFDC1Q9BY42 306 aaPredicted RBP13.45□□□□□ -0.26
VEGFA-215ENST00000497139 ZNF341Q9BYN7 854 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 TMEM8AQ9HCN3 771 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 GIT1Q9Y2X7 761 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 PCDHB2Q9Y5E7 798 aa13.45□□□□□ -0.26
VEGFA-215ENST00000497139 hCG_1818297A0A087WSY0 165 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 KRT1P04264 644 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 KITP10721 976 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 ATF7P17544 494 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-215ENST00000497139 MRPS5P82675 430 aaKnown RBP13.44□□□□□ -0.26
VEGFA-215ENST00000497139 PSMD6Q15008 389 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 BBS9Q3SYG4 887 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 ZBED5Q49AG3 693 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 C6orf52Q5T4I8 152 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 WDR78Q5VTH9 848 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 SLC2A7Q6PXP3 512 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 CDHR3Q6ZTQ4 885 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 LRRC47Q8N1G4 583 aaKnown RBP13.44□□□□□ -0.26
VEGFA-215ENST00000497139 HIPK4Q8NE63 616 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 MECRQ9BV79 373 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 FRMD8Q9BZ67 464 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-215ENST00000497139 GIN1Q9NXP7 522 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 MARCOQ9UEW3 520 aaPredicted RBP13.44□□□□□ -0.26
VEGFA-215ENST00000497139 PTBP2Q9UKA9 531 aaKnown RBP13.44□□□□□ -0.26
VEGFA-215ENST00000497139 SLX4Q8IY92 1834 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 MEIS2O14770 477 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 CNOT3O75175 753 aaKnown RBP13.44□□□□□ -0.26
VEGFA-215ENST00000497139 IFNB1P01574 187 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 SERPINB2P05120 415 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 CYP3A4P08684 503 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 WEE2P0C1S8 567 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 ENPEPQ07075 957 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 MAMLD1Q13495 774 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 TRPC3Q13507 836 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 ANKRD22Q5VYY1 191 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 CES4AQ5XG92 561 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 C16orf89Q6UX73 402 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 MFSD7Q6UXD7 560 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 GPR141Q7Z602 305 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 CENPSQ8N2Z9 138 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 ADAMTS16Q8TE57 1224 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 SENP7Q9BQF6 1050 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 CYP4F11Q9HBI6 524 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 HSPBP1Q9NZL4 362 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 SLC8A2Q9UPR5 921 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
VEGFA-215ENST00000497139 PRSS51A0A1B0GVH4 220 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 TRDMT1O14717 391 aaKnown RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 TRPA1O75762 1119 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 KRT10P13645 584 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 NDUFA5Q16718 116 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 ZNF362Q5T0B9 420 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 KAZNQ674X7 775 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 PDPK2PQ6A1A2 396 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 NANOGNBQ7Z5D8 188 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 FBXL13Q8NEE6 735 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 STARD8Q92502 1023 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 ISOC1Q96CN7 298 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 TMEM121Q9BTD3 319 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 ZNF652Q9Y2D9 606 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 PCDHA1Q9Y5I3 950 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 IRS2Q9Y4H2 1338 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 FAM86B1E9PN63 330 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 KRT38O76015 456 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 FAM86B2P0C5J1 330 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 CCDC130P13994 396 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 SIK1P57059 783 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 CDKL1Q00532 357 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 GK3PQ14409 553 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 PAOXQ6QHF9 649 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 CARM1Q86X55 608 aa13.43□□□□□ -0.26
VEGFA-215ENST00000497139 PHF13Q86YI8 300 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 TFB1MQ8WVM0 346 aaKnown RBP13.43□□□□□ -0.26
VEGFA-215ENST00000497139 KBTBD7Q8WVZ9 684 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms