RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 PURAQ00577 322 aaKnown RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 DPYSL2Q16555 572 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 LACTB2Q53H82 288 aaPredicted RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 PPP6R3Q5H9R7 873 aaPredicted RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 CST9Q5W186 159 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 NUGGCQ68CJ6 796 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 TWF2Q6IBS0 349 aaKnown RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 TOP6BLQ8N6T0 577 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 CENPIQ92674 756 aaPredicted RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 HSFY1Q96LI6 401 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 TGS1Q96RS0 853 aaKnown RBP13.58□□□□□ -0.24
GARNL3-220ENST00000496711 SMC6Q96SB8 1091 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 KDM4CQ9H3R0 1056 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 USP29Q9HBJ7 922 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 FGFR1OP2Q9NVK5 253 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 HEY1Q9Y5J3 304 aa13.58□□□□□ -0.24
GARNL3-220ENST00000496711 BCLAF3A2AJT9 711 aaKnown RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 CCT8L1PA6NM43 557 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 H0YHG0 523 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 XPO1O14980 1071 aaKnown RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 SNX3O60493 162 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 GHRP10912 638 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 CYP2F1P24903 491 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 LRPAP1P30533 357 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 IL9RQ01113 521 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 EFTUD2Q15029 972 aaKnown RBP eCLIP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 TAF2Q6P1X5 1199 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 C17orf99Q6UX52 265 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 FAM228AQ86W67 206 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 OSTM1Q86WC4 334 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 CDKL3Q8IVW4 592 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 PALM2Q8IXS6 379 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 B3GALNT2Q8NCR0 500 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 ARRDC4Q8NCT1 418 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 FBF1Q8TES7 1133 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 PAFAH2Q99487 392 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 AP4E1Q9UPM8 1137 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 CHMP2BQ9UQN3 213 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 SPAG7O75391 227 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 AKR1A1P14550 325 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 RBL1P28749 1068 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 TKTP29401 623 aaKnown RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 L1CAMP32004 1257 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 ZNF157P51786 506 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 LILRA4P59901 499 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 SPRED3Q2MJR0 410 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 EFHC1Q5JVL4 640 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 C3orf62Q6ZUJ4 267 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 STRADAQ7RTN6 431 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 PACS2Q86VP3 889 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 MRRFQ96E11 262 aaKnown RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 DHRS4Q9BTZ2 278 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 FRMD8Q9BZ67 464 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 DHX35Q9H5Z1 703 aaKnown RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
GARNL3-220ENST00000496711 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 USP15Q9Y4E8 981 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-220ENST00000496711 M0QZ92 97 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 PTGESO14684 152 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 ASMTLO95671 621 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 IGHA2P01877 340 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 ZFXP17010 805 aaPredicted RBP13.56□□□□□ -0.24
GARNL3-220ENST00000496711 ELK3P41970 407 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 ATXN1P54253 815 aaKnown RBP13.56□□□□□ -0.24
GARNL3-220ENST00000496711 WDR4P57081 412 aaKnown RBP13.56□□□□□ -0.24
GARNL3-220ENST00000496711 SLC8A3P57103 927 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 MRPS6P82932 125 aaKnown RBP13.56□□□□□ -0.24
GARNL3-220ENST00000496711 SLC20A2Q08357 652 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 ZKSCAN8Q15776 578 aaPredicted RBP13.56□□□□□ -0.24
GARNL3-220ENST00000496711 CNPY4Q8N129 248 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 C4orf33Q8N1A6 199 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 PPP1R10Q96QC0 940 aaKnown RBP13.56□□□□□ -0.24
GARNL3-220ENST00000496711 HNRNPABQ99729 332 aaKnown RBP13.56□□□□□ -0.24
GARNL3-220ENST00000496711 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 KLC2Q9H0B6 622 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
GARNL3-220ENST00000496711 RAB6BQ9NRW1 208 aa13.56□□□□□ -0.24
GARNL3-220ENST00000496711 TNPO2O14787 897 aaKnown RBP13.55□□□□□ -0.24
GARNL3-220ENST00000496711 DAB1O75553 588 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SPAG6O75602 509 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SUN1O94901 812 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 MATKP42679 507 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 ADIGQ0VDE8 80 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 CBLBQ13191 982 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 XRCC4Q13426 336 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 MTM1Q13496 603 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SPARCL1Q14515 664 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 ADGRD1Q6QNK2 874 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 PIGZQ86VD9 579 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 CCDC185Q8N715 623 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 DENND1AQ8TEH3 1009 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 KCTD15Q96SI1 283 aaPredicted RBP13.55□□□□□ -0.24
GARNL3-220ENST00000496711 DUSP16Q9BY84 665 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 ETNK2Q9NVF9 386 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 GTF2IRD1Q9UHL9 959 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 TRPV2Q9Y5S1 764 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 TEX264Q9Y6I9 313 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 TDRD15B5MCY1 1934 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms