RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 STK17AQ9UEE5 414 aa14.27□□□□□ -0.13
COL1A1-209ENST00000495677 CHORDC1Q9UHD1 332 aaPredicted RBP14.27□□□□□ -0.13
COL1A1-209ENST00000495677 GOLGA8IPA6NC78 632 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 TRABD2BA6NFA1 517 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 GOLGA8JA6NMD2 632 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 PRRT4C9JH25 899 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 TRIM24O15164 1050 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 FLRT2O43155 660 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 GREM1O60565 184 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 CER1O95813 267 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 TNNC2P02585 160 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 CACNA2D1P54289 1103 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 GRIN1Q05586 938 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 MDH1BQ5I0G3 518 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 LSM14AQ8ND56 463 aaKnown RBP14.26□□□□□ -0.13
COL1A1-209ENST00000495677 SETD7Q8WTS6 366 aaKnown RBP14.26□□□□□ -0.13
COL1A1-209ENST00000495677 FBXO32Q969P5 355 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 FAM84AQ96KN4 292 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 UBL7Q96S82 380 aaPredicted RBP14.26□□□□□ -0.13
COL1A1-209ENST00000495677 MMS19Q96T76 1030 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 KIF2CQ99661 725 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 CD93Q9NPY3 652 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 WDR35Q9P2L0 1181 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 FBXO10Q9UK96 956 aa14.26□□□□□ -0.13
COL1A1-209ENST00000495677 COL5A1P20908 1838 aaPredicted RBP14.25□□□□□ -0.13
COL1A1-209ENST00000495677 PTPRJQ12913 1337 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 FRMD3A2A2Y4 597 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 METTL12A8MUP2 240 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 NPC1O15118 1278 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 CILPO75339 1184 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 GCNT3O95395 438 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 STAU1O95793 577 aaKnown RBP14.25□□□□□ -0.13
COL1A1-209ENST00000495677 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
COL1A1-209ENST00000495677 IGLV3-19P01714 112 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 CISD3P0C7P0 127 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 MATKP42679 507 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 CYP4F3Q08477 520 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 ENPP2Q13822 863 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 TRAPPC11Q7Z392 1133 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 WDR49Q8IV35 697 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 SYCP3Q8IZU3 236 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 PDCD7Q8N8D1 485 aaKnown RBP14.25□□□□□ -0.13
COL1A1-209ENST00000495677 RASSF8Q8NHQ8 419 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 C1orf216Q8TAB5 229 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 SCFD1Q8WVM8 642 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 MRPL45Q9BRJ2 306 aaKnown RBP14.25□□□□□ -0.13
COL1A1-209ENST00000495677 B3GNT5Q9BYG0 378 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 ZNF518BQ9C0D4 1074 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 SNX25Q9H3E2 840 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 GAREM1Q9H706 876 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 KIAA1586Q9HCI6 787 aa14.25□□□□□ -0.13
COL1A1-209ENST00000495677 DNAJC17Q9NVM6 304 aaKnown RBP14.25□□□□□ -0.13
COL1A1-209ENST00000495677 BCAT2O15382 392 aaPredicted RBP14.24□□□□□ -0.13
COL1A1-209ENST00000495677 TYRP14679 529 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 OXTRP30559 389 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 CASP5P51878 434 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 BNC1Q01954 994 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 SUZ12Q15022 739 aaKnown RBP14.24□□□□□ -0.13
COL1A1-209ENST00000495677 SMAD1Q15797 465 aaKnown RBP14.24□□□□□ -0.13
COL1A1-209ENST00000495677 B3GALNT2Q8NCR0 500 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 OR6B3Q8NGW1 331 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 RHBDD1Q8TEB9 315 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 WBP2Q969T9 261 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 TOE1Q96GM8 510 aaKnown RBP14.24□□□□□ -0.13
COL1A1-209ENST00000495677 BBS2Q9BXC9 721 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 PCED1AQ9H1Q7 454 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 PCIF1Q9H4Z3 704 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 CCSER2Q9H7U1 834 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
COL1A1-209ENST00000495677 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL1A1-209ENST00000495677 PTPRQQ9UMZ3 2332 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 CLDN5O00501 218 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 PRPF6O94906 941 aaKnown RBP14.23□□□□□ -0.13
COL1A1-209ENST00000495677 ATXN1LP0C7T5 689 aaKnown RBP14.23□□□□□ -0.13
COL1A1-209ENST00000495677 C7P10643 843 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 NCAM1P13591 858 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 ACO1P21399 889 aaKnown RBP14.23□□□□□ -0.13
COL1A1-209ENST00000495677 E2F5Q15329 346 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 PTPRNQ16849 979 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 HLA-BQ31612 363 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 SCAMP5Q8TAC9 235 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 EPSTI1Q96J88 318 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 KCNK16Q96T55 309 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 GPR174Q9BXC1 333 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 KLF16Q9BXK1 252 aaPredicted RBP14.23□□□□□ -0.13
COL1A1-209ENST00000495677 IL21RQ9HBE5 538 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 TBC1D7Q9P0N9 293 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 CCDC39Q9UFE4 941 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 SLC27A6Q9Y2P4 619 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 RAD54BQ9Y620 910 aa14.23□□□□□ -0.13
COL1A1-209ENST00000495677 MUC22E2RYF6 1773 aaPredicted RBP14.22□□□□□ -0.13
COL1A1-209ENST00000495677 MEI4A8MW99 385 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 A8MXQ7 604 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 KCNJ18B7U540 433 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 WASH3PC4AMC7 463 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 NEDD8-MDP1E9PL57 170 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 H3BQV1 296 aa14.22□□□□□ -0.13
COL1A1-209ENST00000495677 TULP1O00294 542 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms