RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 DENND1BQ6P3S1 775 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 KLHDC10Q6PID8 442 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
LIME1-209ENST00000494776 CCDC105Q8IYK2 499 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 DTWD2Q8NBA8 298 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 NDRG1Q92597 394 aaKnown RBP16.73■□□□□ 0.27
LIME1-209ENST00000494776 GOLGA1Q92805 767 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 EXOC4Q96A65 974 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 ECT2Q9H8V3 914 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 PLCB1Q9NQ66 1216 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 CNGB3Q9NQW8 809 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 FAM207AQ9NSI2 230 aaPredicted RBP16.73■□□□□ 0.27
LIME1-209ENST00000494776 TBC1D14Q9P2M4 693 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 RASAL2Q9UJF2 1139 aa16.73■□□□□ 0.27
LIME1-209ENST00000494776 LSM7Q9UK45 103 aaKnown RBP16.73■□□□□ 0.27
LIME1-209ENST00000494776 COL4A3Q01955 1670 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 ZDBF2Q9HCK1 2354 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 E2F8A0AVK6 867 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 LGALS16A8MUM7 142 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 MDM4O15151 490 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
LIME1-209ENST00000494776 PNMA6AP0CW24 399 aaPredicted RBP16.72■□□□□ 0.27
LIME1-209ENST00000494776 ATP1A3P13637 1013 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 GPD2P43304 727 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 ACADSBP45954 432 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 TPM4P67936 248 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 EFEMP1Q12805 493 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 PON2Q15165 354 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 SYCP1Q15431 976 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 MIB1Q86YT6 1006 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 ZNF276Q8N554 614 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 KIAA1958Q8N8K9 716 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 RNF139Q8WU17 664 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 ZFRQ96KR1 1074 aaKnown RBP16.72■□□□□ 0.27
LIME1-209ENST00000494776 FUCA2Q9BTY2 467 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 KLF16Q9BXK1 252 aaPredicted RBP16.72■□□□□ 0.27
LIME1-209ENST00000494776 MIS12Q9H081 205 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 PDCL3Q9H2J4 239 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 STRIP2Q9ULQ0 834 aa16.72■□□□□ 0.27
LIME1-209ENST00000494776 OTOL1A6NHN0 477 aaPredicted RBP16.71■□□□□ 0.27
LIME1-209ENST00000494776 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 FBXO21O94952 628 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 CLCN1P35523 988 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 MAGEA9P43362 315 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 KLK7P49862 253 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 DAOAP59103 153 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 POLR2FP61218 127 aaKnown RBP16.71■□□□□ 0.27
LIME1-209ENST00000494776 LRRC32Q14392 662 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 MEA1Q16626 185 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 ZSCAN23Q3MJ62 389 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 FILIP1LQ4L180 1135 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 BSPRYQ5W0U4 402 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 DPY19L2P1Q6NXN4 242 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 SLC47A2Q86VL8 602 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 PASD1Q8IV76 773 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 FAM71AQ8IYT1 594 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 NEK11Q8NG66 645 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 STK33Q9BYT3 514 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 HSD3B7Q9H2F3 369 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 LMAN1LQ9HAT1 526 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 ABCC13Q9NSE7 274 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 OLA1Q9NTK5 396 aaKnown RBP16.71■□□□□ 0.27
LIME1-209ENST00000494776 CEP83Q9Y592 693 aa16.71■□□□□ 0.27
LIME1-209ENST00000494776 HELZP42694 1942 aaKnown RBP16.7■□□□□ 0.26
LIME1-209ENST00000494776 KMT2EQ8IZD2 1858 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 SHISA7A6NL88 538 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 YJEFN3A6XGL0 299 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 E7ENQ6 273 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 HMBSP08397 361 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
LIME1-209ENST00000494776 GJA4P35212 333 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 PTPN5P54829 565 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 COG7P83436 770 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 GRSF1Q12849 480 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIME1-209ENST00000494776 TXNDC11Q6PKC3 985 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 ADGRG2Q8IZP9 1017 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 SCML4Q8N228 414 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 PRSS33Q8NF86 280 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 IRGQQ8WZA9 623 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 EDEM1Q92611 657 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 OTUB2Q96DC9 234 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 NOX5Q96PH1 765 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 SPAG5Q96R06 1193 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 NAA15Q9BXJ9 866 aaKnown RBP16.7■□□□□ 0.26
LIME1-209ENST00000494776 IRF2BPLQ9H1B7 796 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 NLRC4Q9NPP4 1024 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 SPATA6Q9NWH7 488 aaPredicted RBP16.7■□□□□ 0.26
LIME1-209ENST00000494776 MARCH2Q9P0N8 246 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 PCDHGC3Q9UN70 934 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 DAAM1Q9Y4D1 1078 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 COL4A2P08572 1712 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 ZNF318Q5VUA4 2279 aa16.7■□□□□ 0.26
LIME1-209ENST00000494776 PIEZO1Q92508 2521 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 SLC12A8A0AV02 714 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 F8VZ95 297 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 SART1O43290 800 aaKnown RBP16.69■□□□□ 0.26
LIME1-209ENST00000494776 ADH1CP00326 375 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 RPS9P46781 194 aaKnown RBP16.69■□□□□ 0.26
LIME1-209ENST00000494776 DHCR24Q15392 516 aa16.69■□□□□ 0.26
LIME1-209ENST00000494776 HTR3DQ70Z44 454 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms