RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 EDEM1Q92611 657 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 VCPIP1Q96JH7 1222 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 CDK5RAP1Q96SZ6 601 aaKnown RBP15.26■□□□□ 0.03
BRCA1-223ENST00000494123 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 SPTLC3Q9NUV7 552 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 GDE1Q9NZC3 331 aa15.26■□□□□ 0.03
BRCA1-223ENST00000494123 ZFP37Q9Y6Q3 630 aaPredicted RBP15.26■□□□□ 0.03
BRCA1-223ENST00000494123 NRDCO43847 1150 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 HSF2BPO75031 334 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 GRAP2O75791 330 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 GLI1P08151 1106 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 PFKLP17858 780 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 HDCP19113 662 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 FECHP22830 423 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 TUBP50607 506 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 YWHAZP63104 245 aaKnown RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 C10orf120Q5SQS8 335 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 HFE2Q6ZVN8 426 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 PIWIL1Q96J94 861 aaKnown RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 RPGRIP1Q96KN7 1286 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 MYADMQ96S97 322 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 SLC46A2Q9BY10 475 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 ISCUQ9H1K1 167 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 POPDC2Q9HBU9 364 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 ASNSD1Q9NWL6 643 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 OSER1Q9NX31 292 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 USTQ9Y2C2 406 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 SOWAHDA6NJG2 315 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 IPO7O95373 1038 aaKnown RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 OAS1P00973 400 aaKnown RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 MYBL1P10243 752 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 NCAM1P13591 858 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 ABCB4P21439 1286 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 ATP5C1P36542 298 aaKnown RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 SCNN1AP37088 669 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 RNASE9P60153 205 aaKnown RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 PTP4A2Q12974 167 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 TAF5Q15542 800 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 DNAJC24Q6P3W2 148 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 SLC26A9Q7LBE3 791 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 DNAAF5Q86Y56 855 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 CMTM8Q8IZV2 173 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 ARL14EPQ8N8R7 260 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 ZSCAN18Q8TBC5 510 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 ZNF653Q96CK0 615 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 CYP2S1Q96SQ9 504 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 SELENOOQ9BVL4 669 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 METTL5Q9NRN9 209 aaKnown RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 OLA1Q9NTK5 396 aaKnown RBP15.25■□□□□ 0.03
BRCA1-223ENST00000494123 NUDT5Q9UKK9 219 aa15.25■□□□□ 0.03
BRCA1-223ENST00000494123 XIRP2A4UGR9 3374 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 COCHO43405 550 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 MBL2P11226 248 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-223ENST00000494123 LAMP2P13473 410 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 RRM1P23921 792 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-223ENST00000494123 SPA17Q15506 151 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 C3orf20Q8ND61 904 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 CCDC112Q8NEF3 446 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 ZSWIM3Q96MP5 696 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 LUC7LQ9NQ29 371 aaKnown RBP15.24■□□□□ 0.03
BRCA1-223ENST00000494123 CNOT8Q9UFF9 292 aaKnown RBP15.24■□□□□ 0.03
BRCA1-223ENST00000494123 PRUNE2Q8WUY3 3088 aa15.24■□□□□ 0.03
BRCA1-223ENST00000494123 NUP210Q8TEM1 1887 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-223ENST00000494123 DOCK8Q8NF50 2099 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 ANKRD62A6NC57 917 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 C2CD4DB7Z1M9 353 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 ATMINO43313 823 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-223ENST00000494123 DAB1O75553 588 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 TBX18O95935 607 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 KRT3P12035 628 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 EFEMP1Q12805 493 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 DCAF6Q58WW2 860 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 LRRC8AQ8IWT6 810 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 DEFB106AQ8N104 65 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 ZNF276Q8N554 614 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 CTNNBL1Q8WYA6 563 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-223ENST00000494123 SMARCD2Q92925 531 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 PDLIM2Q96JY6 352 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 SLC22A12Q96S37 553 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 RNF38Q9H0F5 515 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 PARVAQ9NVD7 372 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 MYO1AQ9UBC5 1043 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 RASAL2Q9UJF2 1139 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 DNMT3LQ9UJW3 386 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 NENFQ9UMX5 172 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 NAALADL1Q9UQQ1 740 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 EPN1Q9Y6I3 576 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-223ENST00000494123 SCINQ9Y6U3 715 aa15.23■□□□□ 0.03
BRCA1-223ENST00000494123 DPYSL4O14531 572 aa15.22■□□□□ 0.03
BRCA1-223ENST00000494123 NDUFA10O95299 355 aa15.22■□□□□ 0.03
BRCA1-223ENST00000494123 OLFM2O95897 454 aa15.22■□□□□ 0.03
BRCA1-223ENST00000494123 H2AFZP0C0S5 128 aa15.22■□□□□ 0.03
BRCA1-223ENST00000494123 GALCP54803 685 aa15.22■□□□□ 0.03
BRCA1-223ENST00000494123 CCDC173Q0VFZ6 552 aa15.22■□□□□ 0.03
BRCA1-223ENST00000494123 FAM78AQ5JUQ0 283 aa15.22■□□□□ 0.03
BRCA1-223ENST00000494123 C10orf76Q5T2E6 689 aa15.22■□□□□ 0.03
BRCA1-223ENST00000494123 DCUN1D2Q6PH85 259 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms