RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 C9IYK1 514 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 HHLA1C9JL84 531 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 I3L4J1 428 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 NDC80O14777 642 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 TRPA1O75762 1119 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 AP1G2O75843 785 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 TMEM63AO94886 807 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 ACSL3O95573 720 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 TTC4O95801 387 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 POMCP01189 267 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 IFNB1P01574 187 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 RBP3P10745 1247 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 IBSPP21815 317 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 IL4RP24394 825 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 CYP2F1P24903 491 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 PCSK1P29120 753 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 HPDP32754 393 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 RPL22P35268 128 aaKnown RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 MATKP42679 507 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 CTCFP49711 727 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 MAP3K7CLP57077 242 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 DAOAP59103 153 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 PPP2R2AP63151 447 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 PAN2Q504Q3 1202 aaKnown RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 BOLA3Q53S33 107 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 TNFAIP8L3Q5GJ75 292 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 LRRC31Q6UY01 552 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 CEP128Q6ZU80 1094 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 HFE2Q6ZVN8 426 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 CROCCP2Q86T23 111 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 UNC45BQ8IWX7 931 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 SIX6OS1Q8N1H7 587 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 ARFGAP2Q8N6H7 521 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 CPT1BQ92523 772 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 NDRG1Q92597 394 aaKnown RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 RTP4Q96DX8 246 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 NPY6RQ99463 290 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 ULBP1Q9BZM6 244 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 TRPV6Q9H1D0 765 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 LRRC4Q9HBW1 653 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 MTMR10Q9NXD2 777 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 TPX2Q9ULW0 747 aaKnown RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 NOVA2Q9UNW9 492 aaKnown RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
CLCN6-208ENST00000494028 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 COL4A6Q14031 1691 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 SMIM23A6NLE4 172 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 M0QZQ0 153 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 NRP1O14786 923 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 FBXO21O94952 628 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 GNRH1P01148 92 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 ITGB1P05556 798 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 L1CAMP32004 1257 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 RDXP35241 583 aaKnown RBP11.09□□□□□ -0.63
CLCN6-208ENST00000494028 TKTL1P51854 596 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 RABGGTBP53611 331 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 NRLP54845 237 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 SLC8A3P57103 927 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 MAGOHP61326 146 aaKnown RBP11.09□□□□□ -0.63
CLCN6-208ENST00000494028 AUHQ13825 339 aaKnown RBP11.09□□□□□ -0.63
CLCN6-208ENST00000494028 FASTKD3Q14CZ7 662 aaKnown RBP11.09□□□□□ -0.63
CLCN6-208ENST00000494028 SLC25A52Q3SY17 297 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 ANKRD20A8PQ5CZ79 823 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 RAB41Q5JT25 222 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 CLLU1OSQ5K130 101 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 ANKRD22Q5VYY1 191 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 LEKR1Q6ZMV7 388 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 MAP7D3Q8IWC1 876 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 NAT8LQ8N9F0 302 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 OR10T2Q8NGX3 314 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 MYCBPAPQ8TBZ2 947 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 RSAD2Q8WXG1 361 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 RSPH1Q8WYR4 309 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 FAM149B1Q96BN6 582 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 SMARCD1Q96GM5 515 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 SUSD3Q96L08 255 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 C9orf72Q96LT7 481 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 QKIQ96PU8 341 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLCN6-208ENST00000494028 CSPG4P5Q96PW8 444 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 WDR83Q9BRX9 315 aaKnown RBP11.09□□□□□ -0.63
CLCN6-208ENST00000494028 RHOBTB2Q9BYZ6 727 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 DHX35Q9H5Z1 703 aaKnown RBP11.09□□□□□ -0.63
CLCN6-208ENST00000494028 NRDE2Q9H7Z3 1164 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 SAYSD1Q9NPB0 183 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 UBN1Q9NPG3 1134 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 RGS18Q9NS28 235 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 SAGE1Q9NXZ1 904 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 FZD10Q9ULW2 581 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 PCNTO95613 3336 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 LTBP2Q14767 1821 aa11.09□□□□□ -0.63
CLCN6-208ENST00000494028 CFAP69A5D8W1 941 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 F8W810 466 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 TMEM189-UBE2V1I3L0A0 370 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 RGS16O15492 202 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-208ENST00000494028 B3GAT3O94766 335 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 AGTP01019 485 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms