RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 RTN4RL1Q86UN2 441 aaPredicted RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 JAZF1Q86VZ6 243 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 SCUBE1Q8IWY4 988 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 PPIL6Q8IXY8 311 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 GPD1LQ8N335 351 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 KREMEN2Q8NCW0 462 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 TET1Q8NFU7 2136 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 TRIM43Q96BQ3 446 aaPredicted RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 SCLYQ96I15 445 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 RNPC3Q96LT9 517 aaKnown RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 JMJD8Q96S16 334 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 TRIM5Q9C035 493 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 XPO4Q9C0E2 1151 aaKnown RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 TMX1Q9H3N1 280 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 HIPK3Q9H422 1215 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 METTL14Q9HCE5 456 aaKnown RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 KIAA1586Q9HCI6 787 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 AGPAT5Q9NUQ2 364 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 CPSF3Q9UKF6 684 aaKnown RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 TBX21Q9UL17 535 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 ZMYND8Q9ULU4 1186 aaPredicted RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 PIN4Q9Y237 131 aaKnown RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 MRPL42Q9Y6G3 142 aaKnown RBP7.08□□□□□ -1.28
TRA2B-216ENST00000493864 SQORQ9Y6N5 450 aa7.08□□□□□ -1.28
TRA2B-216ENST00000493864 GBF1Q92538 1859 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 TRBV23OR9-2A0A075B6M9 112 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 BLACEA4D250 179 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 LACTBL1A8MY62 500 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 PES1O00541 588 aaKnown RBP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 KIAA0391O15091 583 aaKnown RBP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 MAPK13O15264 365 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 MEFVO15553 781 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 NBNO60934 754 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 CLTAP09496 248 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 CLTBP09497 229 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 TRIM49P0CI25 452 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 TRIM49CP0CI26 452 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 KRT13P13646 458 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 ITGB8P26012 769 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 VAMP7P51809 220 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 CYP24A1Q07973 514 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 MAN2A1Q16706 1144 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 HSF5Q4G112 596 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 VWA3BQ502W6 1294 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 MIIPQ5JXC2 388 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 SLC35F1Q5T1Q4 408 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 TCERG1LQ5VWI1 586 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 FYB2Q5VWT5 728 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 TWF2Q6IBS0 349 aaKnown RBP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 DENND5AQ6IQ26 1287 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 SLC27A1Q6PCB7 646 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 USP53Q70EK8 1073 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 ATG4DQ86TL0 474 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 SLCO6A1Q86UG4 719 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 USP38Q8NB14 1042 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 ANKRD20A12PQ8NF67 263 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 DBF4BQ8NFT6 615 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 PARD3BQ8TEW8 1205 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 CCDC127Q96BQ5 260 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 C1orf159Q96HA4 380 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 FAM84AQ96KN4 292 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 EXOC2Q96KP1 924 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 ADAM2Q99965 735 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 ADPGKQ9BRR6 497 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 HTATIP2Q9BUP3 242 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 WNT8AQ9H1J5 351 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 CXCL16Q9H2A7 254 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 NDST4Q9H3R1 872 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 PDE11AQ9HCR9 933 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 CHST12Q9NRB3 414 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 TOPORSQ9NS56 1045 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 INTS13Q9NVM9 706 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 TMEFF2Q9UIK5 374 aaPredicted RBP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 GPR160Q9UJ42 338 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 HES2Q9Y543 173 aa7.07□□□□□ -1.28
TRA2B-216ENST00000493864 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRA2B-216ENST00000493864 A0A1W2PQC6 194 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 LRRIQ3A6PVS8 624 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 NOTOA8MTQ0 251 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 LGALS16A8MUM7 142 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 ENPP3O14638 875 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 KIAA0355O15063 1070 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 PSPNO60542 156 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 TIMP1P01033 207 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 AFPP02771 609 aaKnown RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 DLATP10515 647 aaKnown RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 ZSCAN20P17040 1043 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 IBSPP21815 317 aaPredicted RBP7.06□□□□□ -1.28
TRA2B-216ENST00000493864 AKAP5P24588 427 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 GCLMP48507 274 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 GALK1P51570 392 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 IRAK1P51617 712 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 UBXN1Q04323 297 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 PPP3CAQ08209 521 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 BFSP1Q12934 665 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 SQSTM1Q13501 440 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 KIR3DS1Q14943 382 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 PSMD6Q15008 389 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 NR0B2Q15466 257 aa7.06□□□□□ -1.28
TRA2B-216ENST00000493864 DCAF4L1Q3SXM0 396 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms