RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 POLR2FP61218 127 aaKnown RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 APBA1Q02410 837 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 YWHAHQ04917 246 aaPredicted RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 RAPGEF1Q13905 1077 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 WDR72Q3MJ13 1102 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 EFHC2Q5JST6 749 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 CYP4A22Q5TCH4 519 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 KLHDC7AQ5VTJ3 777 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 PDZD4Q76G19 769 aaPredicted RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 RRAGAQ7L523 313 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 NLRP8Q86W28 1048 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 CPLX3Q8WVH0 158 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 ING5Q8WYH8 240 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 DNASE1L2Q92874 299 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 CLDN23Q96B33 292 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 ELSPBP1Q96BH3 223 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 ELMO3Q96BJ8 720 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 FAM81BQ96LP2 452 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 ZNF512Q96ME7 567 aaPredicted RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 SPAG5Q96R06 1193 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 PHACTR1Q9C0D0 580 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 NIF3L1Q9GZT8 377 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 GANQ9H2C0 597 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 UBE2TQ9NPD8 197 aaPredicted RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 NLRC4Q9NPP4 1024 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 PRMT8Q9NR22 394 aaPredicted RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 SPATA6Q9NWH7 488 aaPredicted RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 CEP72Q9P209 647 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 MRPS17Q9Y2R5 130 aaKnown RBP12.89□□□□□ -0.35
UPF3A-210ENST00000493727 DAAM1Q9Y4D1 1078 aa12.89□□□□□ -0.35
UPF3A-210ENST00000493727 ANO9A1A5B4 782 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 OR6C75A6NL08 312 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 M0QZQ0 153 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 PIRO00625 290 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 CPB1P15086 417 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 UCHL3P15374 230 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 TGM1P22735 817 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 TBXAS1P24557 533 aaPredicted RBP12.88□□□□□ -0.35
UPF3A-210ENST00000493727 TARSP26639 723 aaKnown RBP12.88□□□□□ -0.35
UPF3A-210ENST00000493727 ATXN1P54253 815 aaKnown RBP12.88□□□□□ -0.35
UPF3A-210ENST00000493727 MFAP3P55082 362 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 YWHAEP62258 255 aaKnown RBP12.88□□□□□ -0.35
UPF3A-210ENST00000493727 ADCY1Q08828 1119 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 PLD1Q13393 1074 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 GAS6Q14393 721 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 UBXN2BQ14CS0 331 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 ARSJQ5FYB0 599 aaPredicted RBP12.88□□□□□ -0.35
UPF3A-210ENST00000493727 FIGNQ5HY92 759 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 PRSS36Q5K4E3 855 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 RNFT1Q5M7Z0 435 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 GJB7Q6PEY0 223 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 LMO3Q8TAP4 145 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 MMS19Q96T76 1030 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 CORO1BQ9BR76 489 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 GPR88Q9GZN0 384 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
UPF3A-210ENST00000493727 ZFP14Q9HCL3 533 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 SIX2Q9NPC8 291 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 IMPACTQ9P2X3 320 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 NCDNQ9UBB6 729 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 DNAJC12Q9UKB3 198 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 SMG5Q9UPR3 1016 aaKnown RBP12.88□□□□□ -0.35
UPF3A-210ENST00000493727 SNX9Q9Y5X1 595 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
UPF3A-210ENST00000493727 GPC6Q9Y625 555 aaPredicted RBP12.88□□□□□ -0.35
UPF3A-210ENST00000493727 FAM170BA6NMN3 283 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 AKR1B15C9JRZ8 316 aaPredicted RBP12.87□□□□□ -0.35
UPF3A-210ENST00000493727 EPHB6O15197 1021 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 HUS1O60921 280 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 NOL4O94818 638 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 OAZ2O95190 189 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 SEC24AO95486 1093 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 CEBPBP17676 345 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 CD72P21854 359 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
UPF3A-210ENST00000493727 GCNT1Q02742 428 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 CSTF1Q05048 431 aaKnown RBP12.87□□□□□ -0.35
UPF3A-210ENST00000493727 FZD5Q13467 585 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 CUL2Q13617 745 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 SCARA3Q6AZY7 606 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 ENOSF1Q7L5Y1 443 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 ALDH16A1Q8IZ83 802 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 E2F7Q96AV8 911 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 ASAH2Q9NR71 780 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 ZSCAN32Q9NX65 697 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
UPF3A-210ENST00000493727 SCN1AP35498 2009 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
UPF3A-210ENST00000493727 RALGAPA1Q6GYQ0 2036 aa12.86□□□□□ -0.35
UPF3A-210ENST00000493727 TICRRQ7Z2Z1 1910 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms