RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CACNG3O60359 315 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 TULP3O75386 442 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 RHOBTB1O94844 696 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 TBX18O95935 607 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 ABL1P00519 1130 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 APODP05090 189 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 FAM200BP0CF97 657 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 TRIM49P0CI25 452 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 TRIM49CP0CI26 452 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 KRT13P13646 458 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 PIK3CAP42336 1068 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 PRCPP42785 496 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 PSEN1P49768 467 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 ORC1Q13415 861 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 USP39Q53GS9 565 aaKnown RBP8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 C2orf27AQ580R0 203 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 RAB41Q5JT25 222 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 ZNF658Q5TYW1 1059 aaPredicted RBP8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 EMC10Q5UCC4 262 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 PMS2CLQ68D20 193 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 ARHGAP17Q68EM7 881 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 FOXR2Q6PJQ5 311 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 C11orf74Q86VG3 221 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 ALLCQ8N6M5 410 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 SLC4A11Q8NBS3 891 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 FBXL13Q8NEE6 735 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 MDGA1Q8NFP4 955 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 TSTD1Q8NFU3 115 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 TIGD1Q96MW7 591 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 SPHK2Q9NRA0 654 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 VPS45Q9NRW7 570 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 RXFP3Q9NSD7 469 aa8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 KMT2BQ9UMN6 2715 aaPredicted RBP8.84□□□□□ -0.99
SMARCB1-207ENST00000491967 MAP1BP46821 2468 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 SCAMP3O14828 347 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 DCLK1O15075 740 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 SLC16A3O15427 465 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 CYP26A1O43174 497 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 ADRB1P08588 477 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 CISD3P0C7P0 127 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 CCDC192P0DO97 292 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 C7P10643 843 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 ATP5C1P36542 298 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 MPLP40238 635 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 P2RY2P41231 377 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 PLA2G4AP47712 749 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 PMS1P54277 932 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 RAD23BP54727 409 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 IFRD2Q12894 506 aaPredicted RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 MAPK8IP2Q13387 824 aaPredicted RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 PNOCQ13519 176 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 SF3A2Q15428 464 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 MAP7D1Q3KQU3 841 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 PREPLQ4J6C6 727 aaPredicted RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 SPDYCQ5MJ68 293 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 EOGTQ5NDL2 527 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 PPP1R26Q5T8A7 1209 aaPredicted RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 PM20D1Q6GTS8 502 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 SMYD4Q8IYR2 804 aaPredicted RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 CCDC33Q8N5R6 958 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 UBR7Q8N806 425 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 TERB1Q8NA31 727 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 TXNDC5Q8NBS9 432 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 TTC16Q8NEE8 873 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 DDX1Q92499 740 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 P2RY11Q96G91 374 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 GTPBP4Q9BZE4 634 aaKnown RBP8.83□□□□□ -1
SMARCB1-207ENST00000491967 IMPG2Q9BZV3 1241 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 GDPD2Q9HCC8 539 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 ARHGEF4Q9NR80 690 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 CISHQ9NSE2 258 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 RAB20Q9NX57 234 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 WDR35Q9P2L0 1181 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 DEC1Q9P2X7 70 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 DNMT3LQ9UJW3 386 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 SH3BP1Q9Y3L3 701 aa8.83□□□□□ -1
SMARCB1-207ENST00000491967 A0A1W2PQF6 199 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 A0A1W2PQH9 124 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 CETN3O15182 167 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 STX10O60499 249 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 STC2O76061 302 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 KLF8O95600 359 aaPredicted RBP8.82□□□□□ -1
SMARCB1-207ENST00000491967 PENKP01210 267 aaPredicted RBP8.82□□□□□ -1
SMARCB1-207ENST00000491967 KLKB1P03952 638 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 RARGP13631 454 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 TRIM21P19474 475 aaKnown RBP8.82□□□□□ -1
SMARCB1-207ENST00000491967 ACO1P21399 889 aaKnown RBP8.82□□□□□ -1
SMARCB1-207ENST00000491967 BCKDHBP21953 392 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 ADORA2BP29275 332 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 MXI1P50539 228 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 SEC13P55735 322 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 FKBP3Q00688 224 aaKnown RBP8.82□□□□□ -1
SMARCB1-207ENST00000491967 LRRC63Q05C16 580 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 ELF2Q15723 593 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 PKDCCQ504Y2 493 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 STPG1Q5TH74 334 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 ANKRD40Q6AI12 368 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 BHLHA9Q7RTU4 235 aa8.82□□□□□ -1
SMARCB1-207ENST00000491967 MIB1Q86YT6 1006 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms