RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 DCAF17Q5H9S7 520 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-211ENST00000491581 PLA2G2CQ5R387 149 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 C10orf76Q5T2E6 689 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 ETFBKMTQ8IXQ9 262 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 TMEFF1Q8IYR6 380 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 GUF1Q8N442 669 aaKnown RBP9.4□□□□□ -0.9
HDAC3-211ENST00000491581 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 ENGASEQ8NFI3 743 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 OR2I1PQ8NGU4 316 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 TNIP3Q96KP6 325 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 HNRNPABQ99729 332 aaKnown RBP9.4□□□□□ -0.9
HDAC3-211ENST00000491581 NIF3L1Q9GZT8 377 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 NACA2Q9H009 215 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 SPHK2Q9NRA0 654 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 TMEM74BQ9NUR3 256 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 MMP17Q9ULZ9 603 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 PLXND1Q9Y4D7 1925 aa9.4□□□□□ -0.9
HDAC3-211ENST00000491581 CEP250Q9BV73 2442 aa9.4□□□□□ -0.91
HDAC3-211ENST00000491581 A0A1W2PQ27 194 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 A0A1W2PQ64 194 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 A0A1W2PQD8 194 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 TCRBV21S2A2A0A5A6 115 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 E2F8A0AVK6 867 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 FAM170AA1A519 330 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 TM4SF5O14894 197 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 FAM163BP0C2L3 166 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 SPINK2P20155 84 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 BMP6P22004 513 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 CNR2P34972 360 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 PSMC2P35998 433 aaKnown RBP9.39□□□□□ -0.91
HDAC3-211ENST00000491581 DHPSP49366 369 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-211ENST00000491581 NUMBP49757 651 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 AP3M2P53677 418 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 NR1H3Q13133 447 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 STPG1Q5TH74 334 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 TCERG1LQ5VWI1 586 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 SNX30Q5VWJ9 437 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 BHLHA9Q7RTU4 235 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 RASSF3Q86WH2 238 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 CACUL1Q86Y37 369 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 CAMKK1Q8N5S9 505 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 UBA3Q8TBC4 463 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 NETO1Q8TDF5 533 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 TMEM174Q8WUU8 243 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 ZC3H10Q96K80 434 aaKnown RBP9.39□□□□□ -0.91
HDAC3-211ENST00000491581 HEXIM2Q96MH2 286 aaKnown RBP9.39□□□□□ -0.91
HDAC3-211ENST00000491581 ZSWIM1Q9BR11 485 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 NT5C1AQ9BXI3 368 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 TMEM8AQ9HCN3 771 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 CISHQ9NSE2 258 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 DNAJC17Q9NVM6 304 aaKnown RBP9.39□□□□□ -0.91
HDAC3-211ENST00000491581 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC3-211ENST00000491581 USP25Q9UHP3 1055 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 RASAL2Q9UJF2 1139 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 NAGPAQ9UK23 515 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 PCDHA5Q9Y5H7 936 aa9.39□□□□□ -0.91
HDAC3-211ENST00000491581 MUC22E2RYF6 1773 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-211ENST00000491581 ATP8B3O60423 1300 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 A0A1W2PQF6 199 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 LNP1A1A4G5 178 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 BCLAF3A2AJT9 711 aaKnown RBP9.38□□□□□ -0.91
HDAC3-211ENST00000491581 TBC1D3BA6NDS4 549 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 C4orf47A7E2U8 309 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 PRR5-ARHGAP8B1AHC4 643 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 RNF225M0QZC1 329 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-211ENST00000491581 BIN1O00499 593 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 IKBKBO14920 756 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 STC2O76061 302 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 ADH1CP00326 375 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 APODP05090 189 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 ZNF806P0C7X5 589 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 KRT13P13646 458 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 TYRP14679 529 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 GABRG2P18507 467 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 MXI1P50539 228 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 SGSHP51688 502 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 KIF11P52732 1056 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 IRX4P78413 519 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 ARHGAP8P85298 464 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 FOXK2Q01167 660 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 AMPD2Q01433 879 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 APBA1Q02410 837 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 GAD2Q05329 585 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 EFEMP1Q12805 493 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 GOLGA7BQ2TAP0 167 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 FBXO43Q4G163 708 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 C10orf120Q5SQS8 335 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 N4BP2L1Q5TBK1 243 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-211ENST00000491581 PMS2CLQ68D20 193 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 INTS8Q75QN2 995 aaKnown RBP9.38□□□□□ -0.91
HDAC3-211ENST00000491581 PIGZQ86VD9 579 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 UNC93AQ86WB7 457 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 ZNF513Q8N8E2 541 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-211ENST00000491581 TERB1Q8NA31 727 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 C12orf50Q8NA57 414 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-211ENST00000491581 PDZD8Q8NEN9 1154 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 CLEC4CQ8WTT0 213 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 SORCS1Q8WY21 1168 aa9.38□□□□□ -0.91
HDAC3-211ENST00000491581 TFAP2BQ92481 460 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms