RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 MMP17Q9ULZ9 603 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.71□□□□□ -1.02
LSM2-213ENST00000491421 CEP250Q9BV73 2442 aa8.71□□□□□ -1.02
LSM2-213ENST00000491421 PTPRDP23468 1912 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 DENND4CQ5VZ89 1909 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 TBC1D3BA6NDS4 549 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 FOXD2O60548 495 aaPredicted RBP8.7□□□□□ -1.02
LSM2-213ENST00000491421 EPN2O95208 641 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 KLF8O95600 359 aaPredicted RBP8.7□□□□□ -1.02
LSM2-213ENST00000491421 RALAP11233 206 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 RARGP13631 454 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 TIE1P35590 1138 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 PPP1R2P41236 205 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 TNFRSF4P43489 277 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 DGKEP52429 567 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 RAD23BP54727 409 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 SLC8A3P57103 927 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 YWHAEP62258 255 aaKnown RBP8.7□□□□□ -1.02
LSM2-213ENST00000491421 MRPS21P82921 87 aaKnown RBP8.7□□□□□ -1.02
LSM2-213ENST00000491421 CUL2Q13617 745 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 ELF2Q15723 593 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 PREPLQ4J6C6 727 aaPredicted RBP8.7□□□□□ -1.02
LSM2-213ENST00000491421 ISM2Q6H9L7 571 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 ANO7Q6IWH7 933 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 KLHDC10Q6PID8 442 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 PRR23CQ6ZRP0 262 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 HTR3DQ70Z44 454 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 CCDC186Q7Z3E2 898 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 TTC30AQ86WT1 665 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 TMEM25Q86YD3 366 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 ETFBKMTQ8IXQ9 262 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 ELOA2Q8IYF1 753 aaPredicted RBP8.7□□□□□ -1.02
LSM2-213ENST00000491421 ALLCQ8N6M5 410 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 NAT16Q8N8M0 369 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 TXNDC5Q8NBS9 432 aaKnown RBP8.7□□□□□ -1.02
LSM2-213ENST00000491421 TATDN2Q93075 761 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 WBP2Q969T9 261 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 SLC35C1Q96A29 364 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 LOXL4Q96JB6 756 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 TPSD1Q9BZJ3 242 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 ARRDC1-AS1Q9H2J1 176 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 METTL14Q9HCE5 456 aaKnown RBP8.7□□□□□ -1.02
LSM2-213ENST00000491421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
LSM2-213ENST00000491421 DEC1Q9P2X7 70 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 DNMT3LQ9UJW3 386 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 NUDT5Q9UKK9 219 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 MAN1B1Q9UKM7 699 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 COQ4Q9Y3A0 265 aa8.7□□□□□ -1.02
LSM2-213ENST00000491421 A0A0A0MRY4 1105 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 ANTXRLA6NF34 631 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 NEDD8-MDP1E9PL57 170 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 DCLK1O15075 740 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 MDM4O15151 490 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 GREM1O60565 184 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 TULP3O75386 442 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 ALDH1A2O94788 518 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 RHOBTB1O94844 696 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 CD19P15391 556 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 CD44P16070 742 aaKnown RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 GBP1P32455 592 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 KIR2DL1P43626 348 aaPredicted RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 PLA2G4AP47712 749 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 PSEN1P49768 467 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 ATXN1P54253 815 aaKnown RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 LRMPQ12912 555 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 CCDC6Q16204 474 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 CRY1Q16526 586 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 GOLGA7BQ2TAP0 167 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 PLK5Q496M5 336 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 CCDC40Q4G0X9 1142 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 HSF5Q4G112 596 aaPredicted RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 USP39Q53GS9 565 aaKnown RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 C10orf76Q5T2E6 689 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 EMC10Q5UCC4 262 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 ARHGAP17Q68EM7 881 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 KLHL10Q6JEL2 608 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 NUDT18Q6ZVK8 323 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 SCD5Q86SK9 330 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 PIGZQ86VD9 579 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 RASSF3Q86WH2 238 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 MIB1Q86YT6 1006 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 ARHGAP18Q8N392 663 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 PHTF2Q8N3S3 785 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 IL17RCQ8NAC3 791 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 ANKRD52Q8NB46 1076 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 MDGA1Q8NFP4 955 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 NETO1Q8TDF5 533 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 DHTKD1Q96HY7 919 aaPredicted RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 ZC3H10Q96K80 434 aaKnown RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 CNOT6LQ96LI5 555 aaKnown RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 CEP63Q96MT8 703 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 CDK5RAP1Q96SZ6 601 aaKnown RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 RTKNQ9BST9 563 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 BBS2Q9BXC9 721 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 UBXN6Q9BZV1 441 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 POLMQ9NP87 494 aaPredicted RBP8.69□□□□□ -1.02
LSM2-213ENST00000491421 CLIC5Q9NZA1 410 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 HESX1Q9UBX0 185 aa8.69□□□□□ -1.02
LSM2-213ENST00000491421 RASAL2Q9UJF2 1139 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms