RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	ACACB	O00763	2458 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	MAP3K13	O43283	966 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	PLA2G4A	P47712	749 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	NDUFA8	P51970	172 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	SHC2	P98077	582 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	DPYD	Q12882	1025 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	ANO4	Q32M45	955 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	EMC10	Q5UCC4	262 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	SPOPL	Q6IQ16	392 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	CLEC20A	Q6ZU45	233 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	TTC30A	Q86WT1	665 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	TMEM25	Q86YD3	366 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	TERB1	Q8NA31	727 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	SPRYD3	Q8NCJ5	442 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	ELMO3	Q96BJ8	720 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	XPO6	Q96QU8	1125 aa	Known RBP	18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	NIF3L1	Q9GZT8	377 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	FAM49B	Q9NUQ9	324 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	HMGXB4	Q9UGU5	601 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	ANGPTL2	Q9UKU9	493 aa		18.92	■□□□□ 0.62
GGA1-223	ENST00000491295	CNOT1	A5YKK6	2376 aa	Known RBP	18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	ABCA7	Q8IZY2	2146 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295		A0A1W2PQ27	194 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295		A0A1W2PQ64	194 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295		A0A1W2PQD8	194 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	LNP1	A1A4G5	178 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	ZBTB24	O43167	697 aa	Predicted RBP	18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	ADAM23	O75077	832 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	KCNK5	O95279	499 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	HNRNPL	P14866	589 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	PML	P29590	882 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	KDSR	Q06136	332 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	ADAM9	Q13443	819 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	TCEAL6	Q6IPX3	200 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	SFTPA1	Q8IWL2	248 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	FAM186B	Q8IYM0	893 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	ZNF513	Q8N8E2	541 aa	Predicted RBP	18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	NAT16	Q8N8M0	369 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	TCEAL3	Q969E4	200 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	CDK5RAP1	Q96SZ6	601 aa	Known RBP	18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	TMEM8A	Q9HCN3	771 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	MARK1	Q9P0L2	795 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	EVL	Q9UI08	416 aa	Predicted RBP	18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	DNMT3L	Q9UJW3	386 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	MYH10	P35580	1976 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	THADA	Q6YHU6	1953 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	NUP205	Q92621	2012 aa		18.91	■□□□□ 0.62
GGA1-223	ENST00000491295	ANTXRL	A6NF34	631 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	HHLA1	C9JL84	531 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	CACNG3	O60359	315 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	GREM1	O60565	184 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	CILP	O75339	1184 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	ACO1	P21399	889 aa	Known RBP	18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	BCKDHB	P21953	392 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	KCNA4	P22459	653 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	ADORA2B	P29275	332 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	NTSR1	P30989	418 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	HOXD12	P35452	270 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	GCLM	P48507	274 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	DHPS	P49366	369 aa	Predicted RBP	18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	PPP3CA	Q08209	521 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	LMAN2	Q12907	356 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	ORC1	Q13415	861 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	EDRF1	Q3B7T1	1238 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	KRT39	Q6A163	491 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	GRAMD4	Q6IC98	578 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	SDE2	Q6IQ49	451 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	KRBA2	Q6ZNG9	492 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	TAS1R2	Q8TE23	839 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	DUSP16	Q9BY84	665 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	UBXN6	Q9BZV1	441 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	TMEM9B	Q9NQ34	198 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	ZNF510	Q9Y2H8	683 aa		18.9	■□□□□ 0.62
GGA1-223	ENST00000491295	TCRBV21S2A2	A0A5A6	115 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	C4orf47	A7E2U8	309 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	STX10	O60499	249 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	TBX18	O95935	607 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	IRF1	P10914	325 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	RARG	P13631	454 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	PGF	P49763	221 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	KIF11	P52732	1056 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	MAP7D1	Q3KQU3	841 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	C10orf76	Q5T2E6	689 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	SLC36A4	Q6YBV0	504 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	CCDC186	Q7Z3E2	898 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	SYT12	Q8IV01	421 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	PGBD3	Q8N328	593 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	HMGB4	Q8WW32	186 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	CHAMP1	Q96JM3	812 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	TWNK	Q96RR1	684 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	BBS2	Q9BXC9	721 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	APOBEC3G	Q9HC16	384 aa	Known RBP	18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	DNAJC17	Q9NVM6	304 aa	Known RBP	18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	CLIC5	Q9NZA1	410 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	USP3	Q9Y6I4	520 aa		18.89	■□□□□ 0.61
GGA1-223	ENST00000491295	ZNF217	O75362	1048 aa		18.88	■□□□□ 0.61
GGA1-223	ENST00000491295	TRIM49	P0CI25	452 aa		18.88	■□□□□ 0.61

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