RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 OLFML3Q9NRN5 406 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 TOR4AQ9NXH8 423 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 STK17AQ9UEE5 414 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 PCDHB13Q9Y5F0 798 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 CEP192Q8TEP8 1941 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 FAM149AA5PLN7 773 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 A8MXQ7 604 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 PRB1P04280 392 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 ATXN1LP0C7T5 689 aaKnown RBP16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 TYRP14679 529 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 CD6P30203 668 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 TNNC1P63316 161 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 WDR45BQ5MNZ6 344 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 SDE2Q6IQ49 451 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 TRAPPC11Q7Z392 1133 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 WDR49Q8IV35 697 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 ELMO3Q96BJ8 720 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 TOE1Q96GM8 510 aaKnown RBP16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 GPR174Q9BXC1 333 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 BBS2Q9BXC9 721 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 SMYD3Q9H7B4 428 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 PRDM16Q9HAZ2 1276 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 STARD13Q9Y3M8 1113 aa16.24■□□□□ 0.19
SCAMP3-208ENST00000490999 PLXNB3Q9ULL4 1909 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 CFAP46Q8IYW2 2715 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 ZNF233A6NK53 670 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 CACNG3O60359 315 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 TACC1O75410 805 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 CLSTN1O94985 981 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 RTN3O95197 1032 aaPredicted RBP16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 TBX18O95935 607 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 BMP15O95972 392 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 CST3P01034 146 aaPredicted RBP16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 NCAM1P13591 858 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 BNC1Q01954 994 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 WDR72Q3MJ13 1102 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 FUT11Q495W5 492 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 PREPLQ4J6C6 727 aaPredicted RBP16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 CCDC157Q569K6 752 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 RRAGBQ5VZM2 374 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 SCARA5Q6ZMJ2 495 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 NUDT18Q6ZVK8 323 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 SV2BQ7L1I2 683 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 ADAM32Q8TC27 787 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 FOXJ1Q92949 421 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 CCDC127Q96BQ5 260 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 P2RY11Q96G91 374 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 CLIC6Q96NY7 704 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 MED10Q9BTT4 135 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 GAREM1Q9H706 876 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 KRT82Q9NSB4 513 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 PLK2Q9NYY3 685 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 HSPBP1Q9NZL4 362 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 NXF1Q9UBU9 619 aaKnown RBP16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 SLCO1B1Q9Y6L6 691 aa16.23■□□□□ 0.19
SCAMP3-208ENST00000490999 A0A1B0GTW7 788 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 FRMD3A2A2Y4 597 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 GREM1O60565 184 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 CILPO75339 1184 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 CD2BP2O95400 341 aaKnown RBP16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 CYP4F3Q08477 520 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 ORC1Q13415 861 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 ALCAMQ13740 583 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 GLRX5Q86SX6 157 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 RDH13Q8NBN7 331 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 BAHD1Q8TBE0 780 aaPredicted RBP16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 OVCA2Q8WZ82 227 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 TMX3Q96JJ7 454 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 MKRN2Q9H000 416 aaKnown RBP16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 SCUBE2Q9NQ36 999 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 TM7SF3Q9NS93 570 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 PANK4Q9NVE7 773 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 BTBD3Q9Y2F9 522 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 CLIC4Q9Y696 253 aa16.22■□□□□ 0.19
SCAMP3-208ENST00000490999 A0A087X0B3 334 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 KCNJ18B7U540 433 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 MDM4O15151 490 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 TLR5O60602 858 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 TNNI1P19237 187 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 DGKGP49619 791 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 TUBP50607 506 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 MYL6P60660 151 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 DCAF12L1Q5VU92 463 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 TMPRSS7Q7RTY8 843 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 JAKMIP2Q96AA8 810 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 DCBLD2Q96PD2 775 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 XPO6Q96QU8 1125 aaKnown RBP16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 CGRRF1Q99675 332 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 PANK2Q9BZ23 570 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 ZDHHC5Q9C0B5 715 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 DMAP1Q9NPF5 467 aaPredicted RBP16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 STON1Q9Y6Q2 735 aa16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 MYO18AQ92614 2054 aaKnown RBP16.21■□□□□ 0.19
SCAMP3-208ENST00000490999 TENM4Q6N022 2769 aa16.21■□□□□ 0.18
SCAMP3-208ENST00000490999 MAST4O15021 2626 aa16.2■□□□□ 0.18
SCAMP3-208ENST00000490999 EIF5BO60841 1220 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms