RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ADGRG2Q8IZP9 1017 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 CCDC26Q8TAB7 109 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 RNF139Q8WU17 664 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 GOLGA1Q92805 767 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 CD101Q93033 1021 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 SECISBP2LQ93073 1101 aaKnown RBP15□□□□□ -0.01
BRCA1-218ENST00000489037 KLF16Q9BXK1 252 aaPredicted RBP15□□□□□ -0.01
BRCA1-218ENST00000489037 CNGB3Q9NQW8 809 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 OLA1Q9NTK5 396 aaKnown RBP15□□□□□ -0.01
BRCA1-218ENST00000489037 FAM86C1Q9NVL1 165 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 OSER1Q9NX31 292 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 RASAL2Q9UJF2 1139 aa15□□□□□ -0.01
BRCA1-218ENST00000489037 OTOL1A6NHN0 477 aaPredicted RBP14.99□□□□□ -0.01
BRCA1-218ENST00000489037 TULP2O00295 520 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 CDK11BP21127 795 aaKnown RBP14.99□□□□□ -0.01
BRCA1-218ENST00000489037 PGFP49763 221 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 RGS7P49802 495 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 GALK1P51570 392 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 MYL5Q02045 173 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 CSTF1Q05048 431 aaKnown RBP14.99□□□□□ -0.01
BRCA1-218ENST00000489037 PTK2Q05397 1052 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 MTAPQ13126 283 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 DHCR24Q15392 516 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 PKDCCQ504Y2 493 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 TMEM196Q5HYL7 178 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 MIIPQ5JXC2 388 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 FKBP15Q5T1M5 1219 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 PM20D1Q6GTS8 502 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 GJB7Q6PEY0 223 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 MIB1Q86YT6 1006 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 ZNF687Q8N1G0 1237 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 SPEM1Q8N4L4 309 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 SLC35F5Q8WV83 523 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 ZFRQ96KR1 1074 aaKnown RBP14.99□□□□□ -0.01
BRCA1-218ENST00000489037 HSFY1Q96LI6 401 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 TAB2Q9NYJ8 693 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 DNAJC12Q9UKB3 198 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 NUDT5Q9UKK9 219 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 ZNF510Q9Y2H8 683 aa14.99□□□□□ -0.01
BRCA1-218ENST00000489037 SCAMP3O14828 347 aaKnown RBP14.98□□□□□ -0.01
BRCA1-218ENST00000489037 ATG13O75143 517 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 FBXO21O94952 628 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 SP9P0CG40 484 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 ADH5P11766 374 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 ACADSBP45954 432 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 CXCL12P48061 93 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 BPIFB4P59827 614 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 GAD2Q05329 585 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 TYRO3Q06418 890 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 EFEMP1Q12805 493 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 MEA1Q16626 185 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 ZNF528Q3MIS6 628 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 FBXO43Q4G163 708 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 PREPLQ4J6C6 727 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-218ENST00000489037 CAVIN1Q6NZI2 390 aaKnown RBP14.98□□□□□ -0.01
BRCA1-218ENST00000489037 MAMSTRQ6ZN01 415 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 C11orf57Q6ZUT1 292 aaPredicted RBP14.98□□□□□ -0.01
BRCA1-218ENST00000489037 HTR3DQ70Z44 454 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 SCML4Q8N228 414 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 ZNF606Q8WXB4 792 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 IRGQQ8WZA9 623 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 DCLK3Q9C098 648 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 VPS16Q9H269 839 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 ST7Q9NRC1 585 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 ABCC13Q9NSE7 274 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 RBM12Q9NTZ6 932 aaKnown RBP14.98□□□□□ -0.01
BRCA1-218ENST00000489037 FANCLQ9NW38 375 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 TMEM63CQ9P1W3 806 aa14.98□□□□□ -0.01
BRCA1-218ENST00000489037 FANCMQ8IYD8 2048 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.97□□□□□ -0.01
BRCA1-218ENST00000489037 MDM4O15151 490 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 SART1O43290 800 aaKnown RBP14.97□□□□□ -0.01
BRCA1-218ENST00000489037 CALCAP01258 141 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 CYP17A1P05093 508 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 NRLP54845 237 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 RAPGEF1Q13905 1077 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 CCINQ13939 588 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 CDKAL1Q5VV42 579 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 FSTL4Q6MZW2 842 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 PMF1Q6P1K2 205 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 NUDT18Q6ZVK8 323 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 BBS7Q8IWZ6 715 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 SHC3Q92529 594 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 CHFRQ96EP1 664 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 LSM14BQ9BX40 385 aaKnown RBP14.97□□□□□ -0.01
BRCA1-218ENST00000489037 MARCH2Q9P0N8 246 aa14.97□□□□□ -0.01
BRCA1-218ENST00000489037 MYO18AQ92614 2054 aaKnown RBP14.97□□□□□ -0.01
BRCA1-218ENST00000489037 SLC12A8A0AV02 714 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 SMTNL1A8MU46 457 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 PIK3R2O00459 728 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 EGFP01133 1207 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 HMBSP08397 361 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 KRT9P35527 623 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 NBL1P41271 181 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 SNX16P57768 344 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 DAOAP59103 153 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 APBA1Q02410 837 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 KRT31Q15323 416 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 ANO4Q32M45 955 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 LY6G5CQ5SRR4 150 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms