RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 RXFP1Q9HBX9 757 aa13.9□□□□□ -0.18
CHD1L-208ENST00000488864 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
CHD1L-208ENST00000488864 CNTN6Q9UQ52 1028 aa13.9□□□□□ -0.18
CHD1L-208ENST00000488864 CHD7Q9P2D1 2997 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 EME2A4GXA9 379 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 THAP12O43422 761 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 CHRNB2P17787 502 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 ZNF132P52740 706 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 RAD23BP54727 409 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 HADHBP55084 474 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 CCDC142Q17RM4 750 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 ANKRD20A2Q5SQ80 823 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 TMEM240Q5SV17 173 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 SEL1L2Q5TEA6 688 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 ANKRD20A1Q5TYW2 823 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 ANKRD20A3Q5VUR7 823 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 TMEM173Q86WV6 379 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 SLC13A5Q86YT5 568 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 ADGRF2Q8IZF7 708 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 CYP4X1Q8N118 509 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 MICAL1Q8TDZ2 1067 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 TFAP2BQ92481 460 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 DDX1Q92499 740 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 FAM167BQ9BTA0 163 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 DPEP3Q9H4B8 488 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 A8MXQ7 604 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 NRP1O14786 923 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 ACAT1P24752 427 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 YWHAEP62258 255 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 FMO1Q01740 532 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 ADCY1Q08828 1119 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 CYP1B1Q16678 543 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 CAPRIN2Q6IMN6 1127 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 ACOT1Q86TX2 421 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 SLC4A11Q8NBS3 891 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 UTP4Q969X6 686 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 HEXIM2Q96MH2 286 aaKnown RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 RUNDC3BQ96NL0 473 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
CHD1L-208ENST00000488864 NKX1-2Q9UD57 310 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-208ENST00000488864 PEX19P40855 299 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 SLC11A1P49279 550 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 INCA1Q0VD86 236 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 OSTM1Q86WC4 334 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 TNS4Q8IZW8 715 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 LRRC43Q8N309 656 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 GBP7Q8N8V2 638 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 ZNF606Q8WXB4 792 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 CD101Q93033 1021 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 TMEM176AQ96HP8 235 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 PWWP2AQ96N64 755 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 SERPINB12Q96P63 405 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 FNDC1Q4ZHG4 1894 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 O00370 1275 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 ALDH2P05091 517 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 BRAFP15056 766 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 GNL1P36915 607 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 PSMC1P62191 440 aaKnown RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 GPC5P78333 572 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 IRX1P78414 480 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 CDR2Q01850 454 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 SNX1Q13596 522 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 SPOUT1Q5T280 376 aaKnown RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 ARMC2Q8NEN0 867 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 ZNF483Q8TF39 744 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 C1orf54Q8WWF1 131 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 B3GALT6Q96L58 329 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 UROC1Q96N76 676 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 LBHD1Q9BQE6 289 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 NT5C1AQ9BXI3 368 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 MRPL9Q9BYD2 267 aaKnown RBP13.88□□□□□ -0.19
CHD1L-208ENST00000488864 SNX25Q9H3E2 840 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 FAM49BQ9NUQ9 324 aa13.88□□□□□ -0.19
CHD1L-208ENST00000488864 TADA2AO75478 443 aa13.87□□□□□ -0.19
CHD1L-208ENST00000488864 BAIAP3O94812 1187 aa13.87□□□□□ -0.19
CHD1L-208ENST00000488864 ATP2A2P16615 1042 aaKnown RBP13.87□□□□□ -0.19
CHD1L-208ENST00000488864 BPIFB4P59827 614 aa13.87□□□□□ -0.19
CHD1L-208ENST00000488864 BLMHQ13867 455 aa13.87□□□□□ -0.19
CHD1L-208ENST00000488864 KYNUQ16719 465 aa13.87□□□□□ -0.19
CHD1L-208ENST00000488864 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
CHD1L-208ENST00000488864 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHD1L-208ENST00000488864 LTBP2Q14767 1821 aa13.87□□□□□ -0.19
CHD1L-208ENST00000488864 EFCAB14O75071 495 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 ECEL1O95672 775 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 GALTP07902 379 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 CCNB1P14635 433 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 FOXN2P32314 431 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 ATP11AP98196 1134 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 CALCOCO2Q13137 446 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 BTG3Q14201 252 aaPredicted RBP13.86□□□□□ -0.19
CHD1L-208ENST00000488864 C2CD6Q53TS8 623 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 RHBDF2Q6PJF5 856 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 TOP6BLQ8N6T0 577 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 ETNK1Q9HBU6 452 aa13.86□□□□□ -0.19
CHD1L-208ENST00000488864 TBK1Q9UHD2 729 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms