RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CETN3O15182 167 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 FOXD2O60548 495 aaPredicted RBP25.89■■□□□ 1.74
LIME1-206ENST00000487026 GREM1O60565 184 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 TULP3O75386 442 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 RHOBTB1O94844 696 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 MPLP40238 635 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 TNFRSF4P43489 277 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 KIR2DL1P43626 348 aaPredicted RBP25.89■■□□□ 1.74
LIME1-206ENST00000487026 ELF2Q15723 593 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 USP39Q53GS9 565 aaKnown RBP25.89■■□□□ 1.74
LIME1-206ENST00000487026 PLA2G2CQ5R387 149 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 BTBD8Q5XKL5 378 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 HTR3DQ70Z44 454 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 ETFBKMTQ8IXQ9 262 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 MDGA1Q8NFP4 955 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 TATDN2Q93075 761 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 CCDC34Q96HJ3 373 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 DUSP16Q9BY84 665 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 CYLDQ9NQC7 956 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 RAB20Q9NX57 234 aa25.89■■□□□ 1.74
LIME1-206ENST00000487026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.88■■□□□ 1.73
LIME1-206ENST00000487026 EPB41P11171 864 aaKnown RBP25.88■■□□□ 1.73
LIME1-206ENST00000487026 RARGP13631 454 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 MXI1P50539 228 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 KIF11P52732 1056 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 CREB5Q02930 508 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 TCEAL6Q6IPX3 200 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 RASSF3Q86WH2 238 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 FBXL13Q8NEE6 735 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 TCEAL3Q969E4 200 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 ARID3AQ99856 593 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 DEC1Q9P2X7 70 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 PCDHGA5Q9Y5G8 931 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 PCDHA5Q9Y5H7 936 aa25.88■■□□□ 1.73
LIME1-206ENST00000487026 ABCA7Q8IZY2 2146 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 GOLGA6L4A6NEF3 574 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 HOXC11O43248 304 aaPredicted RBP25.87■■□□□ 1.73
LIME1-206ENST00000487026 ADAM23O75077 832 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 PPM1JQ5JR12 505 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 SCD5Q86SK9 330 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 ENGASEQ8NFI3 743 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 CNOT6LQ96LI5 555 aaKnown RBP25.87■■□□□ 1.73
LIME1-206ENST00000487026 CISHQ9NSE2 258 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.87■■□□□ 1.732e-6■■□□□ 11.6
LIME1-206ENST00000487026 RMND1Q9NWS8 449 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 NAGPAQ9UK23 515 aa25.87■■□□□ 1.73
LIME1-206ENST00000487026 BCKDHBP21953 392 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 PMS1P54277 932 aaKnown RBP25.86■■□□□ 1.73
LIME1-206ENST00000487026 C10orf120Q5SQS8 335 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 ZNF658Q5TYW1 1059 aaPredicted RBP25.86■■□□□ 1.73
LIME1-206ENST00000487026 TCERG1LQ5VWI1 586 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 ANKRD40Q6AI12 368 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 TPGS1Q6ZTW0 290 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 SLC4A11Q8NBS3 891 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 RLN3Q8WXF3 142 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 TMEM176AQ96HP8 235 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 DUSP9Q99956 384 aaKnown RBP25.86■■□□□ 1.73
LIME1-206ENST00000487026 PNPLA8Q9NP80 782 aa25.86■■□□□ 1.73
LIME1-206ENST00000487026 CIZ1Q9ULV3 898 aaPredicted RBP25.86■■□□□ 1.73
LIME1-206ENST00000487026 STX10O60499 249 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 KCNA4P22459 653 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 RAD23BP54727 409 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 CBWD6Q4V339 395 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 DCAF17Q5H9S7 520 aaPredicted RBP25.85■■□□□ 1.73
LIME1-206ENST00000487026 CBWD3Q5JTY5 395 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 EOGTQ5NDL2 527 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 CBWD5Q5RIA9 395 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 FRMD1Q8N878 549 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 DNAI2Q9GZS0 605 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 VPS45Q9NRW7 570 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 DNMT3LQ9UJW3 386 aa25.85■■□□□ 1.73
LIME1-206ENST00000487026 LSM7Q9UK45 103 aaKnown RBP25.85■■□□□ 1.73
LIME1-206ENST00000487026 BCLAF3A2AJT9 711 aaKnown RBP25.84■■□□□ 1.73
LIME1-206ENST00000487026 NEDD8-MDP1E9PL57 170 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 ALDH1A2O94788 518 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 CAVIN2O95810 425 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 GOLGA8FQ08AF8 430 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 GOLGA8DPQ0D2H9 430 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 HSF5Q4G112 596 aaPredicted RBP25.84■■□□□ 1.73
LIME1-206ENST00000487026 C10orf76Q5T2E6 689 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 PMS2CLQ68D20 193 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 IL31Q6EBC2 164 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 CCDC186Q7Z3E2 898 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 MIB1Q86YT6 1006 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 ZNF513Q8N8E2 541 aaPredicted RBP25.84■■□□□ 1.73
LIME1-206ENST00000487026 HMGB4Q8WW32 186 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 GSDMAQ96QA5 445 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 TSG101Q99816 390 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 BBS2Q9BXC9 721 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 POLMQ9NP87 494 aaPredicted RBP25.84■■□□□ 1.73
LIME1-206ENST00000487026 DNAJC17Q9NVM6 304 aaKnown RBP25.84■■□□□ 1.73
LIME1-206ENST00000487026 BCCIPQ9P287 314 aaKnown RBP eCLIP25.84■■□□□ 1.73
LIME1-206ENST00000487026 HCN2Q9UL51 889 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 USP3Q9Y6I4 520 aa25.84■■□□□ 1.73
LIME1-206ENST00000487026 TRIM49BA6NDI0 452 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 SMC2O95347 1197 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 WASP42768 502 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 PLA2G4AP47712 749 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 BECN1Q14457 450 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 STPG1Q5TH74 334 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms