RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 LACRTQ9GZZ8 138 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 POMKQ9H5K3 350 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 NMUR1Q9HB89 426 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 IL21Q9HBE4 155 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 CNGB3Q9NQW8 809 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 DZANK1Q9NVP4 752 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 ZDHHC7Q9NXF8 308 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 GMIPQ9P107 970 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 DNMT3BQ9UBC3 853 aaKnown RBP13.41□□□□□ -0.26
HDAC6-229ENST00000486665 DENND4AQ7Z401 1863 aa13.41□□□□□ -0.26
HDAC6-229ENST00000486665 NCANO14594 1321 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 C2CD4DB7Z1M9 353 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 GRAP2O75791 330 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 ABL1P00519 1130 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 F11P03951 625 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 CYP1A2P05177 515 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 AVPR2P30518 371 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 DEKP35659 375 aaKnown RBP13.4□□□□□ -0.26
HDAC6-229ENST00000486665 SNX16P57768 344 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 KRT83P78385 493 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 NTHL1P78549 312 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 MAMLD1Q13495 774 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 TAF12Q16514 161 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 PPP1R15BQ5SWA1 713 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
HDAC6-229ENST00000486665 PLEKHA7Q6IQ23 1121 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 TMEM150AQ86TG1 271 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 SCML4Q8N228 414 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 CMASQ8NFW8 434 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-229ENST00000486665 IRGQQ8WZA9 623 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 TRMT2BQ96GJ1 504 aaKnown RBP13.4□□□□□ -0.26
HDAC6-229ENST00000486665 CORO1BQ9BR76 489 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 FBXO44Q9H4M3 255 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 AVENQ9NQS1 362 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-229ENST00000486665 OSER1Q9NX31 292 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 INTUQ9ULD6 942 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 STRIP2Q9ULQ0 834 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 DUSP10Q9Y6W6 482 aa13.4□□□□□ -0.26
HDAC6-229ENST00000486665 MTCL1Q9Y4B5 1905 aaKnown RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 A0A1W2PQH9 124 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 SIGLEC16A6NMB1 481 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 PJA2O43164 708 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 XYLBO75191 536 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 TADA3O75528 432 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 IPO7O95373 1038 aaKnown RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 FYNP06241 537 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 POU2F2P09086 479 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 ZDHHC11BP0C7U3 371 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 MYBL1P10243 752 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 PTPN2P17706 415 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 VAV2P52735 878 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 GSCP56915 257 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 FAM102AQ5T9C2 384 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 BSPRYQ5W0U4 402 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 DNAJC24Q6P3W2 148 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 ELMSAN1Q6PJG2 1045 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 GRASPQ7Z6J2 395 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 KIAA1328Q86T90 577 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 MON1AQ86VX9 555 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 ELMOD1Q8N336 334 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 C3orf20Q8ND61 904 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 JOSD2Q8TAC2 188 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 CTNNBL1Q8WYA6 563 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 SMG7Q92540 1137 aaKnown RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 TRIM11Q96F44 468 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
HDAC6-229ENST00000486665 WDR35Q9P2L0 1181 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 TRIM10Q9UDY6 481 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 SALL4Q9UJQ4 1053 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 TMEM59LQ9UK28 342 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 PPP2R2CQ9Y2T4 447 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 C2orf16Q68DN1 1984 aa13.39□□□□□ -0.27
HDAC6-229ENST00000486665 MYH10P35580 1976 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 ZNF840PA6NDX5 716 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 MOSPD3O75425 235 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 ASGR2P07307 311 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 RHOP08100 348 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 KRT3P12035 628 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 MYL4P12829 197 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 GJA1P17302 382 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 GABRR2P28476 465 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 RFC1P35251 1148 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-229ENST00000486665 CCR2P41597 374 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 ARHGAP25P42331 645 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 EPHA5P54756 1037 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 YWHAGP61981 247 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC6-229ENST00000486665 RPL7AP62424 266 aaKnown RBP13.38□□□□□ -0.27
HDAC6-229ENST00000486665 EFHC1Q5JVL4 640 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 TRNP1Q6NT89 227 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 GAREM2Q75VX8 874 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 SLC26A9Q7LBE3 791 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 GPR149Q86SP6 731 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 EMC1Q8N766 993 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 SLC35G2Q8TBE7 412 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 EDEM1Q92611 657 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms