RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	NAALADL1	Q9UQQ1	740 aa		13.31	□□□□□ -0.28
HDAC7-223	ENST00000485796	CCL26	Q9Y258	94 aa		13.31	□□□□□ -0.28
HDAC7-223	ENST00000485796	DENND4C	Q5VZ89	1909 aa		13.31	□□□□□ -0.28
HDAC7-223	ENST00000485796	DENND4A	Q7Z401	1863 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	TCRBV5S1A1T	A0A578	114 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	COCH	O43405	550 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	NRDC	O43847	1150 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	FBXO21	O94952	628 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	PRAMEF12	O95522	483 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	OAS1	P00973	400 aa	Known RBP	13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	RRM1	P23921	792 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	FCAR	P24071	287 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	HECTD3	Q5T447	861 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	SYPL2	Q5VXT5	272 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	PPP1R2P3	Q6NXS1	205 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	CCDC170	Q8IYT3	715 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	CCDC112	Q8NEF3	446 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	JOSD2	Q8TAC2	188 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	OVCA2	Q8WZ82	227 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	IRGQ	Q8WZA9	623 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	ARHGEF26	Q96DR7	871 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	GCNA	Q96QF7	691 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	ADAM33	Q9BZ11	813 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	PLA2G2F	Q9BZM2	168 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	ISCU	Q9H1K1	167 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	TLR8	Q9NR97	1041 aa	Known RBP	13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	GKN1	Q9NS71	199 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	EHD2	Q9NZN4	543 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	TFR2	Q9UP52	801 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	ANAPC1	Q9H1A4	1944 aa		13.3	□□□□□ -0.28
HDAC7-223	ENST00000485796	OBSL1	O75147	1896 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	TLR5	O60602	858 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	FGF19	O95750	216 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	LTF	P02788	710 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	CALB1	P05937	261 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	LAMP2	P13473	410 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	HDC	P19113	662 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	TFE3	P19532	575 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	RNASE9	P60153	205 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	C1QBP	Q07021	282 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	ZNF268	Q14587	947 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	PUS10	Q3MIT2	529 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	RAB6C	Q53S08	254 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	BTBD8	Q5XKL5	378 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	TANGO2	Q6ICL3	276 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	PARM1	Q6UWI2	310 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	DEFB106A	Q8N104	65 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	EMC1	Q8N766	993 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	PDZD8	Q8NEN9	1154 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	ADAM32	Q8TC27	787 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	ADAMTS19	Q8TE59	1207 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	RSAD2	Q8WXG1	361 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	USP13	Q92995	863 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	FAM149B1	Q96BN6	582 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	ZFR	Q96KR1	1074 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	ZNF830	Q96NB3	372 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	NECAB3	Q96P71	396 aa	Predicted RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	ASB2	Q96Q27	587 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	RAB6C	Q9H0N0	254 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	SLITRK6	Q9H5Y7	841 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	METTL5	Q9NRN9	209 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	SMPD4	Q9NXE4	827 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	CLIC5	Q9NZA1	410 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	CALCOCO1	Q9P1Z2	691 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	LIMD1	Q9UGP4	676 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	SFMBT1	Q9UHJ3	866 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	TMEM59L	Q9UK28	342 aa		13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	REXO2	Q9Y3B8	237 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	TCF20	Q9UGU0	1960 aa	Known RBP	13.29	□□□□□ -0.28
HDAC7-223	ENST00000485796	EIF3CL	B5ME19	914 aa	Known RBP	13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	SCAMP3	O14828	347 aa	Known RBP	13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	NDUFA10	O95299	355 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	OLFM2	O95897	454 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	ABCB4	P21439	1286 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	FLT3	P36888	993 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	PPP3CC	P48454	512 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	GALC	P54803	685 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	YWHAZ	P63104	245 aa	Known RBP	13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	CCZ1B	P86790	482 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	CCZ1	P86791	482 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	ZP2	Q05996	745 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	EFEMP1	Q12805	493 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	SPA17	Q15506	151 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	ARHGAP15	Q53QZ3	475 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	C10orf120	Q5SQS8	335 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	PPP1R15B	Q5SWA1	713 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	OTUD1	Q5VV17	481 aa	Predicted RBP	13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	SLC26A9	Q7LBE3	791 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	CMTM8	Q8IZV2	173 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	FGF14	Q92915	247 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	ZNF653	Q96CK0	615 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	ASB16	Q96NS5	453 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	SLC2A13	Q96QE2	648 aa		13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	EIF3C	Q99613	913 aa	Known RBP	13.28	□□□□□ -0.28
HDAC7-223	ENST00000485796	TRIM7	Q9C029	511 aa		13.28	□□□□□ -0.28

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