RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	VPS33B	Q9H267	617 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	CHST8	Q9H2A9	424 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	XPNPEP3	Q9NQH7	507 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	DACT1	Q9NYF0	836 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	XPR1	Q9UBH6	696 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	FANCA	O15360	1455 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	BCL9L	Q86UU0	1499 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	SHANK2	Q9UPX8	1470 aa		4.54	□□□□□ -1.68
VPS8-223	ENST00000485024	MROH2B	Q7Z745	1585 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	ABCC2	Q92887	1545 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	PRSS29P	A6NIE9	313 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024		M0QYG6	137 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	DNAJB5	O75953	348 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	AGFG2	O95081	481 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	DHRS4L1	P0CG22	281 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	ACVR2A	P27037	513 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	PHKA1	P46020	1223 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	UCP3	P55916	312 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	TCF15	Q12870	199 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	SPARCL1	Q14515	664 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	MGAT5B	Q3V5L5	792 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	TUBB8	Q3ZCM7	444 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	SPDYE7P	Q495Y7	208 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	DCAF12L1	Q5VU92	463 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	SLC9A4	Q6AI14	798 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	MZT2A	Q6P582	158 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	RINL	Q6ZS11	566 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	AMIGO2	Q86SJ2	522 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	GATAD2A	Q86YP4	633 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	GALNT15	Q8N3T1	639 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	SLC35B2	Q8TB61	432 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	TBC1D15	Q8TC07	691 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	RNF31	Q96EP0	1072 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	SMO	Q99835	787 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	ZSWIM1	Q9BR11	485 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	ZHX3	Q9H4I2	956 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	KCTD5	Q9NXV2	234 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	LRFN1	Q9P244	771 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	CA14	Q9ULX7	337 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	SHOC2	Q9UQ13	582 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	ATP11B	Q9Y2G3	1177 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	NEU2	Q9Y3R4	380 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	NOX1	Q9Y5S8	564 aa		4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	BLM	P54132	1417 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS8-223	ENST00000485024	IGKV2D-30	A0A075B6S6	120 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	CDHR4	A6H8M9	788 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	GLP2R	O95838	553 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	ATXN1L	P0C7T5	689 aa	Known RBP	4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	CKB	P12277	381 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	TPH1	P17752	444 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	PDIA3	P30101	505 aa	Known RBP	4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	LRPAP1	P30533	357 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	SERPINF1	P36955	418 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	MAPK9	P45984	424 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	CPT1A	P50416	773 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	ZNF844	Q08AG5	666 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	TBX2	Q13207	712 aa	Predicted RBP	4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	ARHGEF7	Q14155	803 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	IQCB1	Q15051	598 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	MAPRE1	Q15691	268 aa	Known RBP	4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	RAB30	Q15771	203 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	TAF12	Q16514	161 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	ZNF260	Q3ZCT1	412 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	MORN5	Q5VZ52	161 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	GGT6	Q6P531	493 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	LAYN	Q6UX15	382 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	GAS2L3	Q86XJ1	694 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	RHOT2	Q8IXI1	618 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	COLGALT2	Q8IYK4	626 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	SLC17A8	Q8NDX2	589 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	FAM71B	Q8TC56	605 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	TBC1D20	Q96BZ9	403 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	EID2B	Q96D98	161 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	LRRC46	Q96FV0	321 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	ZNF668	Q96K58	619 aa	Predicted RBP	4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	MED15	Q96RN5	788 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	IMPG2	Q9BZV3	1241 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	TMEM74B	Q9NUR3	256 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	TBC1D23	Q9NUY8	699 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	MID2	Q9UJV3	735 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	CAPN11	Q9UMQ6	739 aa		4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	LRRFIP2	Q9Y608	721 aa	Known RBP	4.52	□□□□□ -1.69
VPS8-223	ENST00000485024	GRIN2A	Q12879	1464 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	FAM234B	A2RU67	622 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	DRGX	A6NNA5	263 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	NPC1	O15118	1278 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	KCNQ3	O43525	872 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	COQ9	O75208	318 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	ITGA2B	P08514	1039 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	IL1R1	P14778	569 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	BTF3	P20290	206 aa	Known RBP	4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	TFF2	Q03403	129 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	ADCK5	Q3MIX3	580 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	MRNIP	Q6NTE8	343 aa		4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	MEPCE	Q7L2J0	689 aa	Known RBP	4.51	□□□□□ -1.69
VPS8-223	ENST00000485024	ATG16L2	Q8NAA4	619 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms