RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 ZMYM5Q9UJ78 669 aa6.74□□□□□ -1.33
NCL-209ENST00000484328 CDH22Q9UJ99 828 aa6.74□□□□□ -1.33
NCL-209ENST00000484328 MAGED2Q9UNF1 606 aaPredicted RBP6.74□□□□□ -1.33
NCL-209ENST00000484328 USP15Q9Y4E8 981 aaPredicted RBP6.74□□□□□ -1.33
NCL-209ENST00000484328 PRUNE2Q8WUY3 3088 aa6.74□□□□□ -1.33
NCL-209ENST00000484328 C2CD4BA6NLJ0 364 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 SIGLEC16A6NMB1 481 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 BTNL10A8MVZ5 291 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 TMCO5BA8MYB1 307 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 H3BQ06 376 aaPredicted RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 DPYSL4O14531 572 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 ZNF197O14709 1029 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 PJA2O43164 708 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 ATMINO43313 823 aaPredicted RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 MBTPS2O43462 519 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 TLR5O60602 858 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 IPO7O95373 1038 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 LTFP02788 710 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 H2AFZP0C0S5 128 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 MYL4P12829 197 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 TCF3P15923 654 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 CEBPBP17676 345 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 KCNA5P22460 613 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 FSHRP23945 695 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 FLT3P36888 993 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 MATKP42679 507 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 VAV2P52735 878 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 HADHBP55084 474 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 ZNF252P-AS1Q0IIN9 211 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 IFRD2Q12894 506 aaPredicted RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 MAMLD1Q13495 774 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 TAF5Q15542 800 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 CCDC85BQ15834 202 aaPredicted RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 TAF12Q16514 161 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 EFHC1Q5JVL4 640 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 ATAT1Q5SQI0 421 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 STXBP5Q5T5C0 1151 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 FAM102AQ5T9C2 384 aaPredicted RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 DNAJC24Q6P3W2 148 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 ZNF662Q6ZS27 426 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 H2AFVQ71UI9 128 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 ACRBPQ8NEB7 543 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 ITFG1Q8TB96 612 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 FNIP1Q8TF40 1166 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 CTNNBL1Q8WYA6 563 aaPredicted RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 RFFLQ8WZ73 363 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 NDRG1Q92597 394 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 MRPS31Q92665 395 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 ZNF653Q96CK0 615 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 ARHGEF26Q96DR7 871 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 TCEAL4Q96EI5 215 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 PGAP3Q96FM1 320 aaPredicted RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 ZFRQ96KR1 1074 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 GCNAQ96QF7 691 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 CDK5RAP1Q96SZ6 601 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 NPY6RQ99463 290 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 SMOC2Q9H3U7 446 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 POMKQ9H5K3 350 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 PIDD1Q9HB75 910 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 TRPV4Q9HBA0 871 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 POPDC2Q9HBU9 364 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 LUC7LQ9NQ29 371 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 METTL5Q9NRN9 209 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 ABCC13Q9NSE7 274 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 PARVAQ9NVD7 372 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 TRPM5Q9NZQ8 1165 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 CNOT8Q9UFF9 292 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 MRPS23Q9Y3D9 190 aaKnown RBP6.73□□□□□ -1.33
NCL-209ENST00000484328 PCDHA13Q9Y5I0 950 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 ADGRG1Q9Y653 693 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 SCINQ9Y6U3 715 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 KIAA1549LQ6ZVL6 1849 aa6.73□□□□□ -1.33
NCL-209ENST00000484328 A0A0A6YYK5 440 aaPredicted RBP6.72□□□□□ -1.33
NCL-209ENST00000484328 FAM170AA1A519 330 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 C2orf78A6NCI8 922 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 RCCD1A6NED2 376 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 TMEM191CA6NGB0 347 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 GOLGA8SH3BPF8 625 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 IRAK2O43187 625 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 COCHO43405 550 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 NRDCO43847 1150 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 ENDOD1O94919 500 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 GJB6O95452 261 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 IGLV3-27P01718 113 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 KRT3P12035 628 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 RARGP13631 454 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 GJA1P17302 382 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 ABCB4P21439 1286 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 FCARP24071 287 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 NOS2P35228 1153 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 RFC1P35251 1148 aaPredicted RBP6.72□□□□□ -1.33
NCL-209ENST00000484328 PTPN9P43378 593 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 ZNF143P52747 638 aaPredicted RBP6.72□□□□□ -1.33
NCL-209ENST00000484328 RPL7AP62424 266 aaKnown RBP6.72□□□□□ -1.33
NCL-209ENST00000484328 GPC5P78333 572 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 KRT83P78385 493 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 SLC7A9P82251 487 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 CYP4F8P98187 520 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 OGDHQ02218 1023 aa6.72□□□□□ -1.33
NCL-209ENST00000484328 RING1Q06587 406 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms