RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TRIM60Q495X7 471 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 DUSP28Q4G0W2 176 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 PABPC1LQ4VXU2 614 aaKnown RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF449Q6P9G9 518 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 DPP8Q6V1X1 898 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 MFSD6Q6ZSS7 791 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CXXC5Q7LFL8 322 aaKnown RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CCDC91Q7Z6B0 441 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 PXKQ7Z7A4 578 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 TTC30AQ86WT1 665 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CCDC105Q8IYK2 499 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 SRBD1Q8N5C6 995 aaKnown RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 TEX9Q8N6V9 391 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 APPL2Q8NEU8 664 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 ETNPPLQ8TBG4 499 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CPT1CQ8TCG5 803 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CCDC47Q96A33 483 aaKnown RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 JAKMIP2Q96AA8 810 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 SH3KBP1Q96B97 665 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF503Q96F45 646 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 WDR92Q96MX6 357 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 MYCBPQ99417 103 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 FUZQ9BT04 418 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CARD11Q9BXL7 1154 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 ITPAQ9BY32 194 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 C11orf54Q9H0W9 315 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 LDAHQ9H6V9 325 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 TAS2R10Q9NYW0 307 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 SAE1Q9UBE0 346 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 TRPS1Q9UHF7 1281 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 CNOT7Q9UIV1 285 aaKnown RBP4.88□□□□□ -1.63
PTCD3-214ENST00000483925 TMCC3Q9ULS5 477 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 DNAJC16Q9Y2G8 782 aa4.88□□□□□ -1.63
PTCD3-214ENST00000483925 VWA3AA6NCI4 1184 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 AQP7P3A6NL99 342 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 TMEM233B4DJY2 109 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 TSPAN4O14817 238 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 VILLO15195 856 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 MTSS1O43312 755 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 CCNT2O60583 730 aaKnown RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 ERAL1O75616 437 aaKnown RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 BEST1O76090 585 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 UNC5CO95185 931 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 IL18BPO95998 194 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 F9P00740 461 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 GRPP07492 148 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 ANXA6P08133 673 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 QDPRP09417 244 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF888P0CJ79 500 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 SRGAP2BP0DMP2 458 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 GAAP10253 952 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 SERPINA4P29622 427 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 SLC5A2P31639 672 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 CDK7P50613 346 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF131P52739 623 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 UCP3P55916 312 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 ANTXR2P58335 489 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 NLRP5P59047 1200 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 CAMK1Q14012 370 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 ARHGEF7Q14155 803 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 STILQ15468 1287 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 INSCQ1MX18 579 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 USP39Q53GS9 565 aaKnown RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 FAM69AQ5T7M9 428 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 TTC22Q5TAA0 569 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 AGBL4Q5VU57 503 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 KANK2Q63ZY3 851 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 PLAG1Q6DJT9 500 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 RINT1Q6NUQ1 792 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 C11orf88Q6PI97 169 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 INO80CQ6PI98 192 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 CASC1Q6TDU7 716 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 SDCCAG8Q86SQ7 713 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 ERC1Q8IUD2 1116 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 TTC39CQ8N584 583 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 ARL6IP6Q8N6S5 226 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 IL17RDQ8NFM7 739 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 NFKBIDQ8NI38 313 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 TACO1Q9BSH4 297 aaKnown RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 CPEB1Q9BZB8 566 aaKnown RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 XPO4Q9C0E2 1151 aaKnown RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 MS4A7Q9GZW8 240 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 VPS16Q9H269 839 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 FAM83DQ9H4H8 585 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 XAB2Q9HCS7 855 aaKnown RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 MOCS1Q9NZB8 636 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 EPS15L1Q9UBC2 864 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 CHORDC1Q9UHD1 332 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-214ENST00000483925 DNAI1Q9UI46 699 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 GTF3C4Q9UKN8 822 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 KNSTRNQ9Y448 316 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 PSAT1Q9Y617 370 aa4.87□□□□□ -1.63
PTCD3-214ENST00000483925 C17orf113A0A1B0GUU1 675 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 GOLGA6L6A8MZA4 724 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 PI4K2BG5E9Z4 385 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 PCDH17O14917 1159 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 GRM6O15303 877 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 SEPT4O43236 478 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms