RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 MIR1-1HGQ9H1L0 117 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 MRPL44Q9H9J2 332 aaKnown RBP11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 SLCO1B1Q9Y6L6 691 aa11.55□□□□□ -0.56
SMARCC1-205ENST00000483847 NEDD8-MDP1E9PL57 170 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 CACNG3O60359 315 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 GREM1O60565 184 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 LDHAP00338 332 aaKnown RBP11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 ZNF883P0CG24 379 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 NCAM1P13591 858 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 PTPN1P18031 435 aaKnown RBP11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 GARTP22102 1010 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 YWHAQP27348 245 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 ITPKBP27987 946 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 GNL1P36915 607 aaPredicted RBP11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 MATKP42679 507 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 PGFP49763 221 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 HLA-BQ31612 363 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 PREPLQ4J6C6 727 aaPredicted RBP11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 HECTD3Q5T447 861 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 DBX2Q6ZNG2 339 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 NUDT18Q6ZVK8 323 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 USP49Q70CQ1 688 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 NUP93Q8N1F7 819 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 PIP4K2CQ8TBX8 421 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 RHBDD1Q8TEB9 315 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 SLC39A7Q92504 469 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 FBXO32Q969P5 355 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 P2RY11Q96G91 374 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 ANKRD36BP1Q96IX9 119 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 ACCSQ96QU6 501 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 KCNK16Q96T55 309 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 B3GNT5Q9BYG0 378 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 MKRN2Q9H000 416 aaKnown RBP11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 WSB2Q9NYS7 404 aaPredicted RBP11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 EXOC7Q9UPT5 735 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 NAV2Q8IVL1 2488 aa11.54□□□□□ -0.56
SMARCC1-205ENST00000483847 TMEM131Q92545 1883 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 KNL1Q8NG31 2342 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 BCAT2O15382 392 aaPredicted RBP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 GCNT3O95395 438 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 CER1O95813 267 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 TYRP14679 529 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 FUT11Q495W5 492 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 CCDC157Q569K6 752 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 DCAF12L1Q5VU92 463 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 SYCP3Q8IZU3 236 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 PDZD8Q8NEN9 1154 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 OR6B3Q8NGW1 331 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 SCFD1Q8WVM8 642 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 DNAJC19Q96DA6 116 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 DUSP9Q99956 384 aaKnown RBP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 BBS2Q9BXC9 721 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 ELOVL4Q9GZR5 314 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 SNX25Q9H3E2 840 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 ITM2CQ9NQX7 267 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 GMIPQ9P107 970 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 USP36Q9P275 1121 aaKnown RBP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 EIF2B4Q9UI10 523 aaKnown RBP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 R3HCC1Q9Y3T6 440 aaKnown RBP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 STON1Q9Y6Q2 735 aa11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 MUC22E2RYF6 1773 aaPredicted RBP11.53□□□□□ -0.56
SMARCC1-205ENST00000483847 A0A1B0GVT2 93 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 FLRT2O43155 660 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 RTN3O95197 1032 aaPredicted RBP11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 TBX18O95935 607 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 CST3P01034 146 aaPredicted RBP11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 TNNC2P02585 160 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 CISD3P0C7P0 127 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 PLA2G2AP14555 144 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 LONP1P36776 959 aaKnown RBP11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 ABCG1P45844 678 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 SNX30Q5VWJ9 437 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 TPGS1Q6ZTW0 290 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 HTR3DQ70Z44 454 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 METTL3Q86U44 580 aaKnown RBP11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 CACUL1Q86Y37 369 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 CBWD2Q8IUF1 395 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 GPD1LQ8N335 351 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 GALNT15Q8N3T1 639 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 CADM4Q8NFZ8 388 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 C1orf216Q8TAB5 229 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 OVCA2Q8WZ82 227 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 BHMTQ93088 406 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 EPSTI1Q96J88 318 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 CDC6Q99741 560 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 IL37Q9NZH6 218 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 SEL1LQ9UBV2 794 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 NFE2L3Q9Y4A8 694 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 PCDHGB2Q9Y5G2 931 aa11.52□□□□□ -0.57
SMARCC1-205ENST00000483847 CABIN1Q9Y6J0 2220 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 MGAQ8IWI9 3026 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 PTPRQQ9UMZ3 2332 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 METTL12A8MUP2 240 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 GFRA2O00451 464 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 KCNK3O14649 394 aa11.51□□□□□ -0.57
SMARCC1-205ENST00000483847 ATXN7O15265 892 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms