RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 LIMK1P53667 647 aa19.03■□□□□ 0.64
ATG4B-221ENST00000483778 ADAM9Q13443 819 aa19.03■□□□□ 0.64
ATG4B-221ENST00000483778 ELF2Q15723 593 aa19.03■□□□□ 0.64
ATG4B-221ENST00000483778 USP39Q53GS9 565 aaKnown RBP19.03■□□□□ 0.64
ATG4B-221ENST00000483778 SCD5Q86SK9 330 aa19.03■□□□□ 0.64
ATG4B-221ENST00000483778 MIB1Q86YT6 1006 aa19.03■□□□□ 0.64
ATG4B-221ENST00000483778 GUF1Q8N442 669 aaKnown RBP19.03■□□□□ 0.64
ATG4B-221ENST00000483778 OLIG1Q8TAK6 271 aa19.03■□□□□ 0.64
ATG4B-221ENST00000483778 CNOT6LQ96LI5 555 aaKnown RBP19.03■□□□□ 0.64
ATG4B-221ENST00000483778 VPS45Q9NRW7 570 aa19.03■□□□□ 0.64
ATG4B-221ENST00000483778 MBD1Q9UIS9 605 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-221ENST00000483778 SCML2Q9UQR0 700 aa19.03■□□□□ 0.64
ATG4B-221ENST00000483778 KMT2BQ9UMN6 2715 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-221ENST00000483778 A0A1W2PQ27 194 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 A0A1W2PQ64 194 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 A0A1W2PQD8 194 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 A0A1W2PQH9 124 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 HOXC11O43248 304 aaPredicted RBP19.02■□□□□ 0.64
ATG4B-221ENST00000483778 CILPO75339 1184 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 RHOBTB1O94844 696 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 CAVIN2O95810 425 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 FAM200BP0CF97 657 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 ACO1P21399 889 aaKnown RBP19.02■□□□□ 0.64
ATG4B-221ENST00000483778 WASP42768 502 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 MCCD1P59942 119 aaPredicted RBP19.02■□□□□ 0.64
ATG4B-221ENST00000483778 GAD2Q05329 585 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 ANO4Q32M45 955 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 ZNF394Q53GI3 561 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 PPP1R26Q5T8A7 1209 aaPredicted RBP19.02■□□□□ 0.64
ATG4B-221ENST00000483778 N4BP2L1Q5TBK1 243 aaPredicted RBP19.02■□□□□ 0.64
ATG4B-221ENST00000483778 PMS2CLQ68D20 193 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 HTR3DQ70Z44 454 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 TATDN2Q93075 761 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 OTUB2Q96DC9 234 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 ERLEC1Q96DZ1 483 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 NT5C1AQ9BXI3 368 aa19.02■□□□□ 0.64
ATG4B-221ENST00000483778 TLR8Q9NR97 1041 aaKnown RBP19.02■□□□□ 0.64
ATG4B-221ENST00000483778 TBC1D3BA6NDS4 549 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 FOXD2O60548 495 aaPredicted RBP19.01■□□□□ 0.63
ATG4B-221ENST00000483778 PSMC2P35998 433 aaKnown RBP19.01■□□□□ 0.63
ATG4B-221ENST00000483778 PNOCQ13519 176 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 IL31Q6EBC2 164 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 INTS8Q75QN2 995 aaKnown RBP19.01■□□□□ 0.63
ATG4B-221ENST00000483778 CCDC26Q8TAB7 109 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 ACOX2Q99424 681 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 ARID3AQ99856 593 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 NIF3L1Q9GZT8 377 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 NACA2Q9H009 215 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 FBXO44Q9H4M3 255 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 CYP3A43Q9HB55 503 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 CYLDQ9NQC7 956 aa19.01■□□□□ 0.63
ATG4B-221ENST00000483778 PCNX2A6NKB5 2137 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 RARGP13631 454 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 KRT13P13646 458 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 ATP5C1P36542 298 aaKnown RBP19■□□□□ 0.63
ATG4B-221ENST00000483778 P2RY2P41231 377 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 KIF11P52732 1056 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 TPGS1Q6ZTW0 290 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 TOGARAM2Q6ZUX3 1019 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 HMGB4Q8WW32 186 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 ERCC4Q92889 916 aaPredicted RBP19■□□□□ 0.63
ATG4B-221ENST00000483778 DUSP9Q99956 384 aaKnown RBP19■□□□□ 0.63
ATG4B-221ENST00000483778 TMEM8AQ9HCN3 771 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19■□□□□ 0.63
ATG4B-221ENST00000483778 DEC1Q9P2X7 70 aa19■□□□□ 0.63
ATG4B-221ENST00000483778 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 C4orf47A7E2U8 309 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 KIF20AO95235 890 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 KLKB1P03952 638 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 PRCPP42785 496 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 DHPSP49366 369 aaPredicted RBP18.99■□□□□ 0.63
ATG4B-221ENST00000483778 IRX4P78413 519 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 MAP7D1Q3KQU3 841 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 C10orf76Q5T2E6 689 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 BTBD8Q5XKL5 378 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 EGFLAMQ63HQ2 1017 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 RNF43Q68DV7 783 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 TMEFF1Q8IYR6 380 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 CCDC47Q96A33 483 aaKnown RBP18.99■□□□□ 0.63
ATG4B-221ENST00000483778 HEXIM2Q96MH2 286 aaKnown RBP18.99■□□□□ 0.63
ATG4B-221ENST00000483778 LSM14BQ9BX40 385 aaKnown RBP18.99■□□□□ 0.63
ATG4B-221ENST00000483778 DUSP16Q9BY84 665 aa18.99■□□□□ 0.63
ATG4B-221ENST00000483778 SCAND2PQ9GZW5 306 aaPredicted RBP18.99■□□□□ 0.63
ATG4B-221ENST00000483778 CIZ1Q9ULV3 898 aaPredicted RBP18.99■□□□□ 0.63
ATG4B-221ENST00000483778 TCRBV21S2A2A0A5A6 115 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 LNP1A1A4G5 178 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-221ENST00000483778 PRRT4C9JH25 899 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 NEDD8-MDP1E9PL57 170 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 GIPC1O14908 333 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 CISD3P0C7P0 127 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 RPL13P26373 211 aaKnown RBP18.98■□□□□ 0.63
ATG4B-221ENST00000483778 PTGER3P43115 390 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 PMS1P54277 932 aaKnown RBP18.98■□□□□ 0.63
ATG4B-221ENST00000483778 RAD23BP54727 409 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 EOGTQ5NDL2 527 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 C10orf120Q5SQS8 335 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 ARMCX6Q7L4S7 300 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 DEFB119Q8N690 84 aa18.98■□□□□ 0.63
ATG4B-221ENST00000483778 ZNF513Q8N8E2 541 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms