RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 EOGTQ5NDL2 527 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 ZNF658Q5TYW1 1059 aaPredicted RBP14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 IL31Q6EBC2 164 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 TADA2BQ86TJ2 420 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 RASSF3Q86WH2 238 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 C12orf40Q86WS4 652 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 TTC30AQ86WT1 665 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 ALLCQ8N6M5 410 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 NAT16Q8N8M0 369 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 TXNDC5Q8NBS9 432 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 KCNV2Q8TDN2 545 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 DDX1Q92499 740 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 JAKMIP2Q96AA8 810 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 CNOT6LQ96LI5 555 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 GSDMAQ96QA5 445 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 XPO6Q96QU8 1125 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 KLF16Q9BXK1 252 aaPredicted RBP14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 DUSP16Q9BY84 665 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 GTPBP4Q9BZE4 634 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 CYLDQ9NQC7 956 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 VPS45Q9NRW7 570 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 OSER1Q9NX31 292 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 RAB20Q9NX57 234 aa14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 HOOK1Q9UJC3 728 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-208ENST00000482272 DCLK1O15075 740 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 HOXC11O43248 304 aaPredicted RBP14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 TULP3O75386 442 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 SMC2O95347 1197 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 TBX18O95935 607 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 RALAP11233 206 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 RARGP13631 454 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 MPLP40238 635 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 PRCPP42785 496 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 KIF11P52732 1056 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 LIMK1P53667 647 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 FKBP3Q00688 224 aaKnown RBP14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 KDSRQ06136 332 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 SF3A2Q15428 464 aaKnown RBP14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 CCDC6Q16204 474 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 ZNF394Q53GI3 561 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 PLA2G2CQ5R387 149 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 PPP1R26Q5T8A7 1209 aaPredicted RBP14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 EMC10Q5UCC4 262 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 ANO7Q6IWH7 933 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 KLHDC10Q6PID8 442 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 TRMT11Q7Z4G4 463 aaKnown RBP14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 TMEM25Q86YD3 366 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 ZNF276Q8N554 614 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 IL17RCQ8NAC3 791 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 TMEM176AQ96HP8 235 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 TPSD1Q9BZJ3 242 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 FAM124BQ9H5Z6 455 aaPredicted RBP14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 WDR35Q9P2L0 1181 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 DNMT3LQ9UJW3 386 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 INVSQ9Y283 1065 aa14.17□□□□□ -0.14
CTDSP1-208ENST00000482272 A0A1W2PQH9 124 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 TRIM49BA6NDI0 452 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 CYP26A1O43174 497 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 GREM1O60565 184 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 KIR2DL1P43626 348 aaPredicted RBP14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 SLC8A3P57103 927 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 CREB5Q02930 508 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 BYSLQ13895 437 aaKnown RBP14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 COBLL1Q53SF7 1204 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 TCERG1LQ5VWI1 586 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 TMEM92Q6UXU6 159 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 ETFBKMTQ8IXQ9 262 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 ZC3H3Q8IXZ2 948 aaKnown RBP14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 MDGA1Q8NFP4 955 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 SPATA20Q8TB22 786 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 P2RY11Q96G91 374 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 CDK5RAP1Q96SZ6 601 aaKnown RBP14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 ARID3AQ99856 593 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 UBXN6Q9BZV1 441 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 CISHQ9NSE2 258 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 NAGPAQ9UK23 515 aa14.16□□□□□ -0.14
CTDSP1-208ENST00000482272 SGK1O00141 431 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 SLC16A3O15427 465 aaKnown RBP14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 ZBTB24O43167 697 aaPredicted RBP14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 CAVIN2O95810 425 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 HNRNPLP14866 589 aaKnown RBP eCLIP14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 CBWD6Q4V339 395 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 PPM1JQ5JR12 505 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 CBWD3Q5JTY5 395 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 CBWD5Q5RIA9 395 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 C10orf120Q5SQS8 335 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 PMS2CLQ68D20 193 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 TPGS1Q6ZTW0 290 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 CCDC186Q7Z3E2 898 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 PGBD3Q8N328 593 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 PHTF2Q8N3S3 785 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 ZNF513Q8N8E2 541 aaPredicted RBP14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 TATDN2Q93075 761 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 TIGD1Q96MW7 591 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 BBS2Q9BXC9 721 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 NMUR1Q9HB89 426 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 CLIC5Q9NZA1 410 aa14.15□□□□□ -0.14
CTDSP1-208ENST00000482272 BCCIPQ9P287 314 aaKnown RBP eCLIP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms